DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and IL18R1

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_003846.1 Gene:IL18R1 / 8809 HGNCID:5988 Length:541 Species:Homo sapiens


Alignment Length:518 Identity:101/518 - (19%)
Similarity:161/518 - (31%) Gaps:186/518 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   562 EIPLFQSTTLSVHFA------PETVKIRIEPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIE 620
            |:||.....:||..|      |....:..||..|:     ...|..:........||:|.....|
Human     5 ELPLTLWVLISVSTAESCTSRPHITVVEGEPFYLK-----HCSCSLAHEIETTTKSWYKSSGSQE 64

  Fly   621 GI----NNTSKPGLWGGTVSTLEFRVNVTQEMNGQV--YTCQSANEALQRSAHEA-----VSLDV 674
            .:    .::|:..|....:......:|.|.....|:  ||.:.....::|:.|..     |:..:
Human    65 HVELNPRSSSRIALHDCVLEFWPVELNDTGSYFFQMKNYTQKWKLNVIRRNKHSCFTERQVTSKI 129

  Fly   675 LYRPKFVPPPSSTAVGVEGESLQVS-----LQTRANPTPVTYKWTK-------DGTTIPQDGDHR 727
            :...||               .|::     .||..|.|.: ||..|       ...||.::.:. 
Human   130 VEVKKF---------------FQITCENSYYQTLVNSTSL-YKNCKKLLLENNKNPTIKKNAEF- 177

  Fly   728 IFADGGSLNFTRLHRDDAGIYSCSASNSQGGATLNIT-----VVVEYGTTIKSV-----SENIVV 782
                           :|.|.|||.......|...|||     .:||..:.|..|     ..::.|
Human   178 ---------------EDQGYYSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAV 227

  Fly   783 NPGEDAMLSC---------------------------------TVEGKPLTEEHVKWERVG---- 810
            ..|::..|:|                                 |.|||....:.::.|.:|    
Human   228 ELGKNVRLNCSALLNEEDVIYWMFGEENGSDPNIHEEKEMRIMTPEGKWHASKVLRIENIGESNL 292

  Fly   811 ---YDMTVKTSTTFANGTSYLHIKDAKREDVGNF---------------------RCVADNRVD- 850
               |:.|| .||...:..|::.::.|...|:...                     .||. .||| 
Human   293 NVLYNCTV-ASTGGTDTKSFILVRKADMADIPGHVFTRGMIIAVLILVAVVCLVTVCVI-YRVDL 355

  Fly   851 -----NPTNRDILL-----------IVK-----------FAPEIAKTPTLLRAASG----TGERG 884
                 :.|.||..|           .:|           ||.||  .|.:|....|    ..||.
Human   356 VLFYRHLTRRDETLTDGKTYDAFVSYLKECRPENGEEHTFAVEI--LPRVLEKHFGYKLCIFERD 418

  Fly   885 RLPCRAQGSPKPQFIWRQDKKDLPINRTY-----KYEVE--------ERKIDSLTYESTLIVD 934
            .:|..|........|.:..:..:.::::|     :||:|        ||||..:..|.|.:.|
Human   419 VVPGGAVVDEIHSLIEKSRRLIIVLSKSYMSNEVRYELESGLHEALVERKIKIILIEFTPVTD 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653 3/10 (30%)
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845 16/87 (18%)
IG_like 585..666 CDD:214653 16/86 (19%)
I-set 678..767 CDD:254352 21/105 (20%)
IGc2 692..757 CDD:197706 15/76 (20%)
Ig 788..849 CDD:143165 18/121 (15%)
Ig 885..960 CDD:143165 14/63 (22%)
FN3 967..1051 CDD:238020
IL18R1NP_003846.1 Ig 28..100 CDD:325142 12/76 (16%)
Ig 129..208 CDD:325142 21/110 (19%)
PHA02785 <171..312 CDD:333475 30/157 (19%)
TIR 378..520 CDD:307630 24/106 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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