DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and IL1R2

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_011510103.1 Gene:IL1R2 / 7850 HGNCID:5994 Length:441 Species:Homo sapiens


Alignment Length:456 Identity:103/456 - (22%)
Similarity:176/456 - (38%) Gaps:97/456 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 IPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMNG---QVYTCQSANEA--LQRSAHEAVSLDVLY 676
            |.::|..|.|:|...|...||    ..|..:::|   ::|.......|  ||.:||...:....:
Human    13 ISVQGAGNNSRPRAAGSQSST----SRVLWKLSGAMLRLYVLVMGVSAFTLQPAAHTGAARSCRF 73

  Fly   677 RPKFVPPPSSTAVGVEGESL-----QVSLQTRANPTP-VTYKWTKDGT--TIPQDGDHRIFADGG 733
            |.:..    .....:|||.:     ||.....|:.:| :...|.|:.:  |:|.:.:.|::|..|
Human    74 RGRHY----KREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG 134

  Fly   734 SLNFTRLHRDDAGIYSCSASNSQGGATLNITV-----------VVEYGTTIKSVSENIVVNPGED 787
            :|......::|:|.|.|:..|:.....::|.:           .:.|...:...:..::|.|.  
Human   135 ALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPD-- 197

  Fly   788 AMLSCTVEGKPLTEEHVKWERVGYDMTVKTSTTF--ANGTSYLHIKDAKREDVGNFRCVA----D 846
              ||.....|  |:..::|.:... :..|.:..|  ..||::|.:.|...||.|.:|||.    :
Human   198 --LSEFTRDK--TDVKIQWYKDSL-LLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHE 257

  Fly   847 NRVDNPTNRDILLIVKFAPE----IAKTPTLLRAASGTGERGRLPCR---AQGSPKPQFIWRQDK 904
            .:..|.| |.|.|.:|...|    :..:| |...::..|.|..:||:   ..|:|....:| ...
Human   258 GQQYNIT-RSIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLW-WTA 319

  Fly   905 KDLPINRTY---------KYEVEERKIDSLTYESTLIVDKVAPAD-YGAYECVARNELGEAVETV 959
            .|..|...|         :.|..|...:.:  |..||.|.|...| :..::||..|.|  :.:|:
Human   320 NDTHIESAYPGGRVTEGPRQEYSENNENYI--EVPLIFDPVTREDLHMDFKCVVHNTL--SFQTL 380

  Fly   960 RLEITSQPD--------PPLSLNILNVTHDTVTLAWTPGFDGGLKASYRVRYRMADREQYKYIDG 1016
            |..:.....        .||||..|.:              ||:....|.::|...      .||
Human   381 RTTVKEASSTFSWGIVLAPLSLAFLVL--------------GGIWMHRRCKHRTGK------ADG 425

  Fly  1017 L 1017
            |
Human   426 L 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845 14/53 (26%)
IG_like 585..666 CDD:214653 14/53 (26%)
I-set 678..767 CDD:254352 21/107 (20%)
IGc2 692..757 CDD:197706 20/72 (28%)
Ig 788..849 CDD:143165 17/66 (26%)
Ig 885..960 CDD:143165 21/87 (24%)
FN3 967..1051 CDD:238020 12/59 (20%)
IL1R2XP_011510103.1 PHA02785 49..370 CDD:165149 74/336 (22%)
Ig1_IL1R_like 73..168 CDD:143233 22/98 (22%)
Ig2_IL1R2_like 179..273 CDD:143305 25/101 (25%)
ig 284..384 CDD:278476 26/105 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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