DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and PXDN

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_036425.1 Gene:PXDN / 7837 HGNCID:14966 Length:1479 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
PXDNNP_036425.1 leucine-rich repeat 45..63 CDD:275380
leucine-rich repeat 66..87 CDD:275380
LRR 1 87..108
LRR_4 110..151 CDD:289563
LRR_8 111..170 CDD:290566
LRR 2 111..132
leucine-rich repeat 112..135 CDD:275378
LRR_4 135..175 CDD:289563
LRR 3 135..156
leucine-rich repeat 136..159 CDD:275378
LRR_8 158..>195 CDD:290566
LRR 4 159..180
leucine-rich repeat 160..183 CDD:275378
leucine-rich repeat 184..196 CDD:275378
TPKR_C2 192..243 CDD:301599
Ig 246..333 CDD:299845
I-set 246..333 CDD:254352
I-set 342..429 CDD:254352
Ig 346..429 CDD:299845
I-set 433..519 CDD:254352
Ig3_Peroxidasin 446..519 CDD:143222
I-set 525..611 CDD:254352
Ig4_Peroxidasin 542..610 CDD:143223
An_peroxidase 741..1282 CDD:281139
peroxidasin_like 864..1303 CDD:188658
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1342..1380
VWC 1415..1470 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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