DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and Btnl4

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_109671.1 Gene:Btnl4 / 632126 MGIID:1932036 Length:586 Species:Mus musculus


Alignment Length:567 Identity:104/567 - (18%)
Similarity:180/567 - (31%) Gaps:169/567 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 HLQLLRLLAVIVLASAPVPSHAQQQKFRT-TPHD-LQVLEGAEAMMRCEV---ANVAG--AVQWT 105
            |:..|.:|..::       |....|:||. .|.| :....|.||::.|.|   .||..  .::|.
Mouse    12 HVPCLFVLTQLL-------SWVTTQEFRVFGPSDPIVAAPGGEAILPCSVFPAMNVENMEELRWF 69

  Fly   106 KDGFALGFSAVI-------------PGFPRYSVL--GDRKQGIYNLRISNASINDDADYQCQVGP 155
            :..|:   .||:             ||:.:.::|  ....||...:||.|...:|...|.|....
Mouse    70 RSRFS---EAVLFYRDQEEQKEGQMPGYSQRTLLVKDQFHQGTAAVRILNVQASDSGIYICHFQQ 131

  Fly   156 ARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQLKCIVANAKPAAQIVWYRGNVEY 220
            ...........|:..:.....:.|||         .|:..:.:.|:.:...|..|:.|.....|.
Mouse   132 GVFYDEAILELKVAAMGSVPEVHIKG---------PEDGGVCVVCMTSGWYPEPQVHWKDSRGEN 187

  Fly   221 KPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQARHKALSPDMPMRATVQL--SVLYPP 283
            ......:|..:.....|:|.:.|.::   |......||...:..|..:   :||...  ...:|.
Mouse   188 LTAFSSETHTKDAEGLFSTETLLVVR---DSSVRNVTCSIFNPILGQE---KATAMFIPEPFFPQ 246

  Fly   284 GPPYIEGYSAGET------------LRRGQTVELMCRSRGGNPPAQLIWYKNGSQIRM---AYRT 333
            ..|:...:....|            |||..:..|..:....|     ...:....::.   |.||
Mouse   247 ASPWKPAFLVTLTMMGLLVLGTSYLLRREHSARLKVQQETVN-----FQREKDESLKTRDDALRT 306

  Fly   334 SGRLSENIYTFTAEAGDNKARFR--------------------------CEASNVMSQNPLKAEV 372
            :|.|       ..|....||.:|                          ..|..:::.:|.:..|
Mouse   307 AGAL-------MVERDRRKAAYRAAWKKAQLYADWRKEHFEAWTFTLDPASAHPILAISPDRLSV 364

  Fly   373 E-------LSVLFAPTHVTVMG-----------PTEARVGDIVPLTCTTAPSNPPAEIKWMVG-- 417
            .       |..||.     |:|           ..:.|.||               ..||.:|  
Mouse   365 SRKDSTLCLDDLFC-----VLGIRGISSGRHYWEVKLRNGD---------------SSKWTLGVC 409

  Fly   418 --GRQVRNATSKTIVSPEGGWT---TTSNITAVVEPNKRSLVV----ICHGLNMQLTENVVSTHT 473
              |...:...|:  ...:|.||   ::|...|.::.....|.:    ...|:.:..||..:|.:.
Mouse   410 REGVDRKGCFSE--CPHKGFWTVGRSSSGYLAYIDTGTALLSLRQAPQSVGVFVDYTEGDISFYN 472

  Fly   474 INVLYPPAPPLISGY---MEGQIIP-----AGSV----QKLLCVSSG 508
            ::.:    .|:.|.:   ..|.:.|     :|:|    |.:.|.|.|
Mouse   473 MSDM----SPMFSFHEASFSGTLFPYFRLKSGNVSMIIQSMACASEG 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 27/118 (23%)
Ig 76..155 CDD:299845 24/100 (24%)
IG_like 186..279 CDD:214653 16/94 (17%)
Ig 197..279 CDD:299845 15/83 (18%)
IG_like 296..376 CDD:214653 19/127 (15%)
Ig 300..361 CDD:299845 12/89 (13%)
Ig 380..454 CDD:299845 15/91 (16%)
IG_like 490..573 CDD:214653 8/28 (29%)
Ig 501..560 CDD:299845 3/8 (38%)
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
Btnl4NP_109671.1 Ig 45..145 CDD:386229 23/102 (23%)
Ig <167..233 CDD:386229 13/71 (18%)
SPRY_PRY_C-I_1 344..497 CDD:293968 30/178 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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