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Protein Alignment sns and CG34353

DIOPT Version :9

Sequence 1:	NP_001036532.1	Gene:	sns / 44097	FlyBaseID:	FBgn0024189	Length:	1542	Species:	Drosophila melanogaster
Sequence 2:	NP_001287571.1	Gene:	CG34353 / 5740590	FlyBaseID:	FBgn0085382	Length:	581	Species:	Drosophila melanogaster

Alignment Length:	452	Identity:	113/452 - (25%)
Similarity:	182/452 - (40%)	Gaps:	96/452 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   665 SAH-EAVSLDVLY---RPKFVPPPSSTAVGVEGESLQVSLQTRANPTPVTYKWTKDGTTIPQDGD 725
            |.| |:||...:.   .|.|: ..|.|...:.||::.:..:. ||.......| |.|..|...|.
  Fly    69 SLHFESVSAQSMMTKNEPMFI-SRSETFKFITGETIVLPCEV-ANTDTYVVAW-KRGIAILTAGS 130

  Fly   726 HRIFAD-------GGSLNFTRLHRDDAGIYSCS-ASNSQGGATLNITVVVEYGTTIKSVSENIVV 782
            .::..|       |.:|........|||.|.|. |:......|..:.::|.......|...::.|
  Fly   131 VKVTPDPRVRLVNGFNLQIRDALPTDAGDYICQIATMDPREITHTVEILVPPRIHHISTGGHLQV 195

  Fly   783 NPGEDAMLSCTVEGKPLTEEHVKWERVGYDMTVKTSTTFANGTSYLH-----IKDAKREDVGNFR 842
            ..|....:.|:..|.|:  .:|.|.|        .:....||...||     |::..|...|.:.
  Fly   196 KKGSSVRIECSATGNPM--PNVTWSR--------KNNILPNGEEKLHSHVLSIENVDRHKGGVYI 250

  Fly   843 CVADNRVDNPTNRDILLIVKFAPEIA-KTPTLLRAASGTGERGRLPCRAQGSPKPQFIWRQDKKD 906
            |.|:|||..|.:..::|.|.|:|||: :.|.:.   ||.|....|.|...|..:|:.||.:|
  Fly   251 CTANNRVGQPASSQVVLHVLFSPEISVERPVVF---SGEGHEATLVCIVHGETQPEVIWFKD--- 309

  Fly   907 LPINRTYKYEVEERKI-DSLTYESTLIVDKVAPADYGAYECVARNELGEAVETVRLEITSQPD-- 968
                 |.:.:..||.| ::.....|||:.||.|.|:|.|.|||.|:||:|.:|  |:::.:|:
  Fly   310 -----TMQLDTTERHIMETRGSRHTLIIRKVHPQDFGNYSCVAENQLGKARKT--LQLSGKPNVA 367

  Fly   969 ----PPLSLNILNVTHDTVTLAWTPGFDGGLKASYRVRYRMADREQYKYIDGLPNSHKLTIGGLR 1029
                ||:|     ...|...::|.......:: .|::.:|.           ||..|:: :|
  Fly   368 VFNSPPIS-----QYKDRYNISWAVDSHSPIE-EYKLSFRK-----------LPQGHEV-VG--- 411

  Fly  1030 MNTLYLFSVMSWNELGQSSYLPDLARAETKEAPPPSHP---ASSLGGGPPTTSQTPLGGTSG 1088
                        |.:..||....::.:.::......|.   .|::||         |.|.||
  Fly   412 ------------NAIDSSSSSSSMSSSSSQMYGSGLHAHRIGSNMGG---------LSGLSG 452

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.