DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and kirrel3b

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_021323594.1 Gene:kirrel3b / 572369 ZFINID:ZDB-GENE-100713-3 Length:795 Species:Danio rerio


Alignment Length:541 Identity:139/541 - (25%)
Similarity:211/541 - (39%) Gaps:88/541 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 HAQQQKFRTTPHDLQVLEGAEAMMRCEVANVAGAVQWTKDGFALGFSAVIPGFPRYSVLGDRKQG 132
            |.....|...|.||.|:.|....:.|.:....|.|.|.:||.|||....:.|:|||:|:||...|
Zfish    25 HGVNAVFSQQPQDLVVVAGQPVTLPCSIPGYHGVVLWLRDGLALGVGRDLSGYPRYAVVGDHGSG 89

  Fly   133 IYNLRISNASINDDADYQCQVGPARLNSAIRAN-AKLTVISPPASIEIKGYSHNSKVEVRENQDL 196
            .::|||....:.|||.::||.    :.:|:|:. |:|||:.||....|.|   ...|.:|....|
Zfish    90 EHHLRIQKVELMDDAVFECQA----IQAAMRSRPARLTVLVPPDDPMITG---GPVVSLRAGDPL 147

  Fly   197 QLKCIVANAKPAAQIVWYR------GNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTE 255
            .|.|...||||||.|:|.|      |.:..|...|:       .:|.:|.|:|.:.....:...:
Zfish   148 NLTCHADNAKPAASIIWIRNGEVLNGAMYSKTLLRD-------GRRESTVSTLYISASNIESGQK 205

  Fly   256 YTCQARHKALSPDMPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNPPAQLIW 320
            ..|:|.:||:........|:.:..|     |.:......:.:..|..|:..|.::...|..|..|
Zfish   206 IICRASNKAVPNGKETSVTIDIQHL-----PLVNLSVEPQPVLEGNLVKFHCSAKANPPVTQYKW 265

  Fly   321 YKNGSQIRMAYRTSGRLSENI--YTFTAEAGDNKARFRCEASNVMSQNPLKAEVELSVLFAPTHV 383
            .|.||.|:   ..||...|.|  ::|..|.      ..||.:|.:....:...|:  |.|.|...
Zfish   266 AKGGSVIK---EVSGDTYEVIVDHSFFTEP------VSCEVTNPLGSTNISRNVD--VYFGPRMA 319

  Fly   384 TVMGPTEARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVRNATSKTIVSPEGGWTTTSNITAVVEP 448
            ......:..:|......|... .||...|.||..|       |..::|.|       ||..:...
Zfish   320 AEPQSLQVDLGSDAVFNCAWT-GNPSLTIVWMKRG-------SGVVLSNE-------NILTLKSV 369

  Fly   449 NKRSL-VVICHGL--NMQLTENVVSTHTINVLYPPAPPLISGYMEGQIIPAGSVQKLLCVSSGGN 510
            .:... ..:|..:  .:...|..||. |:|     .||.||.....| .|.|...::.|......
Zfish   370 RQEDAGKYVCRAVVPRVGAAEKEVSL-TVN-----GPPTISSTQTHQ-APHGEKGQIKCFIRSTP 427

  Fly   511 PLATLTWYKNDKRINSVI--RAADKSVSAEITILANV-------SDNQAQYRCEASNSATEIPLF 566
            |...:.|...:..:.|..  |...::||.|..:|:.:       :|.|..|.|.|.||       
Zfish   428 PPDRIAWSWKETVLESGTSGRYTVETVSTEDGVLSTLTMSNIVPADFQTIYNCTAWNS------- 485

  Fly   567 QSTTLSVHFAPETVKIRIEPE 587
                    |..:|..||::.:
Zfish   486 --------FGSDTEIIRLKEQ 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 35/97 (36%)
Ig 76..155 CDD:299845 30/78 (38%)
IG_like 186..279 CDD:214653 26/98 (27%)
Ig 197..279 CDD:299845 23/87 (26%)
IG_like 296..376 CDD:214653 20/81 (25%)
Ig 300..361 CDD:299845 18/62 (29%)
Ig 380..454 CDD:299845 14/74 (19%)
IG_like 490..573 CDD:214653 19/91 (21%)
Ig 501..560 CDD:299845 15/67 (22%)
Ig 584..666 CDD:299845 0/4 (0%)
IG_like 585..666 CDD:214653 0/3 (0%)
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
kirrel3bXP_021323594.1 IG_like 35..124 CDD:214653 34/92 (37%)
Ig2_KIRREL3-like 146..227 CDD:143236 24/87 (28%)
Ig_2 235..312 CDD:316418 20/87 (23%)
I-set 316..397 CDD:333254 18/96 (19%)
Ig5_KIRREL3 399..496 CDD:143306 27/112 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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