DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and kirrel3a

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_700618.5 Gene:kirrel3a / 571887 ZFINID:ZDB-GENE-091117-44 Length:774 Species:Danio rerio


Alignment Length:607 Identity:132/607 - (21%)
Similarity:218/607 - (35%) Gaps:174/607 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 FRTTPHDLQVLEGAEAMMRCEVANVAGAVQWTKDGFALGFSAVIPGFPRYSVLGDRKQGIYNLRI 138
            |...||||.::.|....:.|.:....|.|.|.|||.|||.:..:.|:|||.|:||..:|.|:|.|
Zfish    23 FIQQPHDLVIVAGEPVTLPCTIIGYQGMVLWVKDGLALGVNRDLSGYPRYDVIGDHSKGEYHLLI 87

  Fly   139 SNASINDDADYQCQVGPARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQLKCIVA 203
            ....:.||..::||                       :|::.|.|                    
Zfish    88 ERTELVDDGSFECQ-----------------------AIQVAGRS-------------------- 109

  Fly   204 NAKPAAQIVWYRGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQARHKALSPD 268
              :||                                                            
Zfish   110 --RPA------------------------------------------------------------ 112

  Fly   269 MPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNPPAQLIWYKNGSQIRMAYRT 333
                   ||:||.||..|.|.| :...:||.|.::.|.|.:....|.|.:||.:||..|..|..|
Zfish   113 -------QLTVLVPPDDPVIIG-APVVSLRAGDSLNLTCHANNAKPAASIIWIRNGEVINGAAYT 169

  Fly   334 -----SGRLSENIYTFTAEAG--DNKARFRCEASNVMSQNPLKAEVELSVLFAPTHVTVMGPTEA 391
                 .|:....:.|....|.  ::..:..|.|||..:.|..:|.|.:.:...|.....:.|...
Zfish   170 KTLLRDGKRESTVSTLHISASNIESGQQITCRASNKAAPNGKEATVTIDIQHFPLVNLSVEPQPV 234

  Fly   392 RVGDIVPLTCTTAPSNPP-AEIKWMVGGRQVRNATSKTIVSPEGGWTTTSNITAVVEPNKRSLVV 455
            ..|::|...| .|.:||| ...:|..||..:.:||..|       :....:.:...||      |
Zfish   235 LEGNLVKFHC-AAKANPPVTHYRWAKGGSMITDATGDT-------YEVLVDHSFFTEP------V 285

  Fly   456 ICHGLNMQLTENVVSTHTINVLYPPAPPLISGYMEGQIIPAGSVQKLLCVSSGGNPLATLTWYKN 520
            .|...|...:.|:  :..::|.:.|.   ::...:...:..||.....|... |||..|:.|.  
Zfish   286 SCEVTNALGSTNI--SRNVDVYFGPR---LAAEPQSLQVDRGSDAVFSCAWI-GNPSLTIVWM-- 342

  Fly   521 DKRINSVIRAADKSVSAEITILANVSDNQAQYRCEASNSATEIPLF----QSTTLSVHFAPETVK 581
             ||.:.|:.:.:.:    :|:.|...::..:|.|.|     .:|..    :...|:|:..|....
Zfish   343 -KRGHGVVLSNENT----LTLKAVRQEDAGKYVCRA-----VVPRVGVGEKEVMLTVNGPPSISS 397

  Fly   582 IRIEPEELRPGMEATIICDSSSSNPPAKLSW-WKDGIPIEGIN--------NTSKPGLWGGTVST 637
              .:.::...|.:..|.|...|:.||.:::| ||:.:...|.:        :|.:     |.:||
Zfish   398 --TQTQQALYGEKGQIKCFIRSTPPPDRIAWSWKETVLESGTSGRYTVETVSTEE-----GVIST 455

  Fly   638 LEFRVNVTQEMNGQVYTCQSAN 659
            |..| |:.......:|.|.:.|
Zfish   456 LTMR-NIVPTDFQTIYNCTAWN 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 31/95 (33%)
Ig 76..155 CDD:299845 30/78 (38%)
IG_like 186..279 CDD:214653 4/92 (4%)
Ig 197..279 CDD:299845 4/81 (5%)
IG_like 296..376 CDD:214653 24/86 (28%)
Ig 300..361 CDD:299845 17/67 (25%)
Ig 380..454 CDD:299845 17/74 (23%)
IG_like 490..573 CDD:214653 18/86 (21%)
Ig 501..560 CDD:299845 14/58 (24%)
Ig 584..666 CDD:299845 20/85 (24%)
IG_like 585..666 CDD:214653 20/84 (24%)
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
kirrel3aXP_700618.5 Ig 25..116 CDD:299845 37/202 (18%)
IG_like 27..116 CDD:214653 37/200 (19%)
I-set 123..217 CDD:254352 27/94 (29%)
Ig2_KIRREL3-like 139..219 CDD:143236 21/79 (27%)
Ig_2 227..304 CDD:290606 20/92 (22%)
I-set 308..389 CDD:254352 19/96 (20%)
IGc2 322..373 CDD:197706 15/58 (26%)
Ig5_KIRREL3 391..488 CDD:143306 21/94 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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