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Protein Alignment sns and zgc:172122

DIOPT Version :9

Sequence 1:	NP_001036532.1	Gene:	sns / 44097	FlyBaseID:	FBgn0024189	Length:	1542	Species:	Drosophila melanogaster
Sequence 2:	NP_001104674.1	Gene:	zgc:172122 / 571844	ZFINID:	ZDB-GENE-080208-1	Length:	367	Species:	Danio rerio

Alignment Length:	376	Identity:	73/376 - (19%)
Similarity:	138/376 - (36%)	Gaps:	102/376 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   360 SNVMSQNPLKAEVELSVL-------FAPTHVTVMGPTEARVGDIVPLTCTTAPSNPPAEIKWMVG 417
            |..:|...|||.:.|.:|       .||:|:..|    |.:..::....|........::.|:
Zfish     2 SGYVSAIALKAWMTLVLLSRIQGKVLAPSHLQAM----AGLPFVLACNITMEKGEVLKQVLWL-- 60

  Fly   418 GRQVRNATSKTIVSPEGGWTTTSNITAVVEPNKRSLVVICHGLNMQLTENVVSTHTINVLYPPAP 482
                 :.|:|||:.              .:|:|...|....|:.:.........||..:....|.
Zfish    61 -----DMTNKTILH--------------YQPDKYDHVTRVDGVELSQQTAAPQAHTSVITIRKAA 106

  Fly   483 PLISG--YMEGQIIPAGSVQKLLCVS-------------SGGNPLATLTWYKNDKRINSVI--RA 530
            |...|  :....:.|:|..:...|:|             ..|.|:..|..|....|:..|:  :.
Zfish   107 PANEGCYHCLFDVYPSGQQRGRTCLSLTAMVEQMDNKTVVSGKPVTFLCNYILSMRVRQVLWKKT 171

  Fly   531 ADKSVSAEITILANVSDN--QAQYRCEASNSATEIPLFQSTTLSVHFAPE------TVKIRIEPE 587
            |::..:|.:......|..  .:.::...|.:    |....|.||:|.|..      |.:....|:
Zfish   172 AEQGDTAIVASYVKYSKPVVTSPFKGRVSLN----PSLGQTRLSIHHAQTEDEGCYTCEYHTYPD 232

  Fly   588 ELR-----------PGMEATII----------CDSSSSNPPAKLSWWKDGIPIEGINNTSKPGL- 630
            .::           |..||:.:          | |:.|.|.|::||     .:||.|.|..|.:
Zfish   233 GIKSTTACLSVYVLPNPEASYVTVSQGIIEANC-SAMSRPAAEISW-----NVEGHNQTLGPAVI 291

  Fly   631 -----WGGT---VSTLEFRVNVTQEMNGQVYTCQSANEALQRSAHEAVSLD 673
                 ..||   ||:::.:   ::.::.::..|:..::.|:.:.:  |||:
Zfish   292 SFYQQGDGTTMVVSSIQLQ---SELLDDELVKCEVHHQGLEAAIY--VSLN 337

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.