DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and Cntn6

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_059079.2 Gene:Cntn6 / 53870 MGIID:1858223 Length:1028 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
Cntn6NP_059079.2 Ig 26..120 CDD:416386
Ig strand A 27..31 CDD:409353
Ig strand A' 34..39 CDD:409353
Ig strand B 45..53 CDD:409353
Ig strand C 58..64 CDD:409353
Ig strand C' 66..69 CDD:409353
Ig strand D 76..80 CDD:409353
Ig strand E 82..88 CDD:409353
Ig strand F 95..104 CDD:409353
Ig strand G 107..120 CDD:409353
Ig 129..214 CDD:416386
Ig strand A 130..135 CDD:409353
Ig strand B 139..145 CDD:409353
Ig strand C 153..159 CDD:409353
Ig strand C' 164..166 CDD:409353
Ig strand D 171..176 CDD:409353
Ig strand E 179..183 CDD:409353
Ig strand F 193..201 CDD:409353
Ig strand G 203..214 CDD:409353
Ig 227..315 CDD:416386
Ig strand A 227..232 CDD:409353
Ig strand A' 235..240 CDD:409353
Ig strand B 243..252 CDD:409353
Ig strand C 258..262 CDD:409353
Ig strand C' 265..267 CDD:409353
Ig strand D 276..279 CDD:409353
Ig strand E 280..285 CDD:409353
Ig strand F 293..301 CDD:409353
Ig strand G 304..315 CDD:409353
Ig 319..403 CDD:416386
Ig strand A 319..322 CDD:409353
Ig strand A' 326..330 CDD:409353
Ig strand B 334..342 CDD:409353
Ig strand C 348..353 CDD:409353
Ig strand C' 355..358 CDD:409353
Ig strand D 363..367 CDD:409353
Ig strand E 369..374 CDD:409353
Ig strand F 383..390 CDD:409353
Ig strand G 394..403 CDD:409353
Ig5_Contactin 408..496 CDD:409358
Ig strand B 427..431 CDD:409358
Ig strand C 440..444 CDD:409358
Ig strand E 462..466 CDD:409358
Ig strand F 476..481 CDD:409358
Ig strand G 489..492 CDD:409358
Ig 500..598 CDD:416386
Ig strand A' 507..512 CDD:409353
Ig strand B 515..523 CDD:409353
Ig strand C 532..536 CDD:409353
Ig strand E 560..564 CDD:409353
Ig strand F 573..580 CDD:409353
Ig strand G 587..591 CDD:409353
FN3 598..691 CDD:238020
FN3 703..796 CDD:238020
FN3 805..898 CDD:238020
FN3 903..983 CDD:214495
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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