DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and MYBPC1

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_006719468.1 Gene:MYBPC1 / 4604 HGNCID:7549 Length:1195 Species:Homo sapiens


Alignment Length:1123 Identity:210/1123 - (18%)
Similarity:363/1123 - (32%) Gaps:412/1123 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 PEKREDTVEESTAKRFTTTSSLKLKPG--------PDDDYTEYTC-----QARHKALSPDMPMRA 273
            |.|.|:.|...:|          |.||        .|.|:|....     ||:..|.|       
Human    32 PAKDEEEVSPPSA----------LPPGLGSRALERKDSDWTLVETPPGEEQAKQNANS------- 79

  Fly   274 TVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGN---PPAQLIWYKNGSQIRMAYRTSG 335
              |||:|:...|       .|.|::.|:.:..:.:.:..:   .|. :.|:| |..:.:|.:...
Human    80 --QLSILFIEKP-------QGGTVKVGEDITFIAKVKAEDLLRKPT-IKWFK-GKWMDLASKAGK 133

  Fly   336 RLS--------ENIYTFTAE---AGDNKA-RFRCEA----------------------------- 359
            .|.        ..:|||..:   |.||.| .:|||.                             
Human   134 HLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDIRS 198

  Fly   360 -----------------SNVMSQNPLKAEVE---------------------------------- 373
                             |.::.:..:|.:.|                                  
Human   199 AFKRSGEGQEDAGELDFSGLLKRREVKQQEEEPQVDVWELLKNAKPSEYEKIAFQYGITDLRGML 263

  Fly   374 -----------LSVLFA----PTHVTVMGPTEARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVRN 423
                       .|..||    |.:....|   .||..:|.|      ::|..|:||...|:::|.
Human   264 KRLKRMRREEKKSAAFAKILDPAYQVDKG---GRVRFVVEL------ADPKLEVKWYKNGQEIRP 319

  Fly   424 ATSKTIVSPEGGWTTTSNITAVVEPNKRSLVVICHGL----NMQLTENVVSTHTINV-------- 476
            :| |.|...:|                      |..:    |.|:|::  |.:.:..        
Human   320 ST-KYIFEHKG----------------------CQRILFINNCQMTDD--SEYYVTAGDEKCSTE 359

  Fly   477 LYPPAPP-LISGYMEGQIIPAGSVQKLLCVSSGGNPLATLTWYKNDKRINS-------------- 526
            |:...|| :::..:|......|...:|.|..|..:  |.:.|:||.:.|..              
Human   360 LFVREPPIMVTKQLEDTTAYCGERVELECEVSEDD--ANVKWFKNGEEIIPGPKSRYRIRVEGKK 422

  Fly   527 ---VIRAADKSVSAEITILANVSDNQAQYRCEASNSATEIPLFQSTTLSVHFAPETVKIRIEPEE 588
               :|..|.|:.:||.:::.....:.|:                   |||...|..:...:..:.
Human   423 HILIIEGATKADAAEYSVMTTGGQSSAK-------------------LSVDLKPLKILTPLTDQT 468

  Fly   589 LRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMNGQVY 653
            :..|.|..:.|: .|.|.|.|  |.|:|:|::..:....  :..|.:..|.....:|::....|:
Human   469 VNLGKEICLKCE-ISENIPGK--WTKNGLPVQESDRLKV--VHKGRIHKLVIANALTEDEGDYVF 528

  Fly   654 TCQSANEALQRSAHEAVSLDVLYRPKFV---PPPSSTAVGVEGESLQVSLQTRANPTPVTYKWTK 715
            ...:.|..|....|      |:..||.:   ....:|...:.|..|::.:.....|.|.. .|::
Human   529 APDAYNVTLPAKVH------VIDPPKIILDGLDADNTVTVIAGNKLRLEIPISGEPPPKA-MWSR 586

  Fly   716 DGTTIPQDGDHRI----FADGGSLNFTRLHRDDAGIYSCSASNSQGGATLNITV-VVEY-----G 770
            ....| .:|..||    :.|..:|......|||:|:|..:..|..|.|..:|.| ||::     .
Human   587 GDKAI-MEGSGRIRTESYPDSSTLVIDIAERDDSGVYHINLKNEAGEAHASIKVKVVDFPDPPVA 650

  Fly   771 TTIKSVSEN-IVVN------PGEDAMLSCTVEGKPLTEEHVKWERVGYDMTVKTSTTF-----AN 823
            .|:..|.:: .::|      .|...:|...:|.|  .::..:|.|:.:|:.  ..|||     ..
Human   651 PTVTEVGDDWCIMNWEPPAYDGGSPILGYFIERK--KKQSSRWMRLNFDLC--KETTFEPKKMIE 711

  Fly   824 GTSYL---------------------------------------------------HI------- 830
            |.:|.                                                   ||       
Human   712 GVAYEVRIFAVNAIGISKPSMPSRPFVPLAVTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDG 776

  Fly   831 ----------KDAKREDVGNFRCVADNRVDNP------TNRDILLIVKFA----PEIAKTPTLLR 875
                      ..||:.|..     .:...|.|      .|:|::...||.    |..||....::
Human   777 YVLEYCFEGSTSAKQSDEN-----GEAAYDLPAEDWIVANKDLIDKTKFTITGLPTDAKIFVRVK 836

  Fly   876 A--ASG-----------------------------------TGERGRLPCRAQGSPKPQFIWRQD 903
            |  |:|                                   .||...|....||.|:|:..|::|
Human   837 AVNAAGASEPKYYSQPILVKEIIEPPKIRIPRHLKQTYIRRVGEAVNLVIPFQGKPRPELTWKKD 901

  Fly   904 KKDLPINRTYKYEVEERKIDSLTYESTLIVDKVAPADYGAYECVARNELGEAVET--VRLEITSQ 966
            ..::..|   :..:...:.|::     :.:.|...:..|.|:...:  :.:.|||  :.::|..:
Human   902 GAEIDKN---QINIRNSETDTI-----IFIRKAERSHSGKYDLQVK--VDKFVETASIDIQIIDR 956

  Fly   967 PDPPLSLNILNVTHDTVTLAWTPGFDGGLKASYRVRYRMADREQYKYIDGLPNSHK--LTIGGLR 1029
            |.||..:.|.:|..:.|.|.|||..|.|..|......:.||::..::...:.:.|:  .||..|.
Human   957 PGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITELV 1021

  Fly  1030 MNTLYLFSVMSWNELGQS 1047
            :...|.|.|.|.|..|.|
Human  1022 IGNEYYFRVFSENMCGLS 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653 17/69 (25%)
Ig 197..279 CDD:299845 17/69 (25%)
IG_like 296..376 CDD:214653 21/185 (11%)
Ig 300..361 CDD:299845 17/121 (14%)
Ig 380..454 CDD:299845 16/73 (22%)
IG_like 490..573 CDD:214653 17/99 (17%)
Ig 501..560 CDD:299845 14/75 (19%)
Ig 584..666 CDD:299845 17/81 (21%)
IG_like 585..666 CDD:214653 17/80 (21%)
I-set 678..767 CDD:254352 24/96 (25%)
IGc2 692..757 CDD:197706 17/68 (25%)
Ig 788..849 CDD:143165 16/133 (12%)
Ig 885..960 CDD:143165 15/76 (20%)
FN3 967..1051 CDD:238020 26/83 (31%)
MYBPC1XP_006719468.1 IG_like 89..184 CDD:214653 20/103 (19%)
Ig 89..173 CDD:299845 20/92 (22%)
I-set 279..362 CDD:254352 24/116 (21%)
Ig 304..363 CDD:299845 16/83 (19%)
I-set 369..453 CDD:254352 17/104 (16%)
IGc2 381..439 CDD:197706 14/59 (24%)
IG_like 466..543 CDD:214653 18/87 (21%)
Ig_C5_MyBP-C 556..641 CDD:143302 22/86 (26%)
IG_like 559..641 CDD:214653 22/83 (27%)
FN3 645..735 CDD:238020 15/93 (16%)
FN3 744..846 CDD:238020 17/106 (16%)
IG_like 872..953 CDD:214653 17/90 (19%)
Ig 882..953 CDD:299845 15/80 (19%)
FN3 957..1040 CDD:238020 26/83 (31%)
I-set 1072..1161 CDD:254352
Ig 1089..1154 CDD:143165
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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