DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and side-VI

DIOPT Version :10

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster


Alignment Length:1395 Identity:284/1395 - (20%)
Similarity:453/1395 - (32%) Gaps:530/1395 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 YIEGYSA-GETLR--RGQTVELMC---RSRGGNPPAQLIWYKNGSQIRMAYRTSGRLSENIYTFT 345
            :.:|:.. ||.||  ...:.::.|   .|:..:....::||||...| .:|.|.|          
  Fly    24 HADGFKPDGEILRVLVNSSAQIKCDVGSSQADDKVLLVVWYKNNLPI-YSYDTRG---------- 77

  Fly   346 AEAG-----------DNKARFRCEASNVMSQNPLKAEVELSVLFAPTHVTVMGPTEARVGDIVPL 399
            |.||           :::|.||                        ||                 
  Fly    78 AHAGTPSHWRDEEVLEDRAVFR------------------------TH----------------- 101

  Fly   400 TCTTAPSNPPAEIKWMVGGRQVRNATSKTIVSP----EGGWTTTSNITAVVEPNKRSLVVICHGL 460
                   ..|||:                |::|    :.|             |.|..|      
  Fly   102 -------KEPAEL----------------IINPVKEKDAG-------------NFRCRV------ 124

  Fly   461 NMQLTENVVSTHTINVLYPPAPPLI------------SGYMEGQIIPAGSVQKLLCVSSGGNPLA 513
            :.:|::...|...:.|:.||..|:|            ..|.||     ||:: :.||..||:|..
  Fly   125 DFKLSQTRNSNVNLEVVVPPTQPIIFNERRLRIDSRAGPYEEG-----GSLE-VTCVVYGGSPPP 183

  Fly   514 TLTWYKNDKRINSVI-RAADKSVSAEITILANVS--DNQAQYRCEASN-----SATEIPLFQSTT 570
            |:.|..|.:..|||: ...|.:::::: ::.|:|  ...|.|.|:|||     .||.|      |
  Fly   184 TVIWLMNGQLQNSVVDYTYDGAINSKL-VVRNLSRIHQHAVYTCQASNFHKKYVATNI------T 241

  Fly   571 LSVHFAPETVKIRIEPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTV 635
            :.::..|..|:|....:.:....:..|.|.:..|.||||::||...:.:.|   .|:.....|.|
  Fly   242 IDLYLRPLLVEISFNNQPMSADRKYEIECQAIGSRPPAKITWWMGNLELHG---HSQKVSEDGNV 303

  Fly   636 STLEFRVNVTQEMNGQVYTCQSANEALQRSAHE-AVSLDVLYRPKF-------VPPPSSTAVGVE 692
            ||....:..|:|.:|:..:|::.||.::....| |:.|:|.:.|..       :.|....    |
  Fly   304 STSVLSITPTREDHGKALSCRATNELVRNGIRETAMKLNVFFIPTLQLDLGSNLNPEDIE----E 364

  Fly   693 GESLQVSLQTRANPTPVTYKWTKDGTTIPQDGDHRIFADGGSLNFTRLHRDDAGIYSCSASNSQG 757
            |:.:....:..|||......|..:...|..:....:....|.|....:.|..||.|:|:|||.:|
  Fly   365 GDDVYFECKVHANPAAYKVVWKHNHQIIQHNQRAGVIVSSGDLALQGVTRHQAGNYTCTASNVEG 429

  Fly   758 GATLNIT-VVVEYGTTIKSVSENIV-VNPGEDAMLSCTVEGKPLTEEHVKWERVGYDMTVKTSTT 820
            ....|:. :.|.|....:...:.|. |...|.|.:.|.|:..| ..|:.||   .::.|.:|   
  Fly   430 DGDSNVVELKVMYKPICRPDQKKIYGVARNEAAEIVCEVDAFP-PPENFKW---SFNNTAET--- 487

  Fly   821 FANGTSYLHIKDAKREDVGNFRCVADNRVDNPTNRDILLIVKFAPEIAKTPTLLRAASGTGERGR 885
                                        .|.|                             :.|.
  Fly   488 ----------------------------FDMP-----------------------------QSGF 495

  Fly   886 LPCRAQGSPKPQFIWRQDKKDLPINRTYKYEVEERKIDSLTYESTLIVDKVAPADYGAYECVARN 950
            .|..||||                              :|||      ..|...|:|...|.|.|
  Fly   496 RPHSAQGS------------------------------TLTY------TPVKEMDFGTIMCWADN 524

  Fly   951 ELGEAVE--TVRLEITSQPDPPLSLNILNVTHDTVTLAWTPGFDGGLKASYRVRYRMADREQYKY 1013
            .:|:..|  ...|....:|:.|.:..::|.|.|::.:....|||||::..:.:       |.:..
  Fly   525 NVGQQKEPCVFHLIAAGKPEAPTNCTVVNQTSDSLEVYCIEGFDGGMRQWFLM-------EIFDQ 582

  Fly  1014 IDGLPNSH------KLTIGGLRMNTLYLFSVMSWNELGQSSYLP----DLARAETKEAPPPSHPA 1068
            ..|...::      .|::.||....|:...|.:.|..|:|..:.    .|..||.:.....|:..
  Fly   583 HSGQLQANISAKFAALSVTGLDAGRLFRIYVYAVNGRGRSDAIALDGYTLKAAEKQTVALTSYKG 647

  Fly  1069 SSLGGGPPTTSQTPLGGTSGMLLVGVGAGIVVVLLNVFVIGCCLHKRNEKRLKRGLELMPAELTE 1133
            |:  ..|.....||:      |.:|:..||:|.                                
  Fly   648 SA--QSPDNFELTPI------LSIGIFVGILVA-------------------------------- 672

  Fly  1134 DSSNTPNLVIIGISLAAFGFLLVNASLVAWFFVHQRRK-------KVAETTNQPAKTATIEMYAP 1191
                   :|.|||...|...|..:.......|||...|       ::.:..:.|...:. |||..
  Fly   673 -------IVCIGIGTIAALKLRSHKHQQQQKFVHPNAKFSRPGNLQIKDKISLPLSHSE-EMYDE 729

  Fly  1192 SS-----YNDTVTGE------------TLSSVSE-----KSESYS----------NEGSSQPEYI 1224
            .:     ||: |.||            .||:.||     |..|.|          :.|:.|....
  Fly   730 KNPDVVPYNE-VDGEYKQKSATQTPSGHLSTTSEVEISCKPGSTSGTGIVQANSADSGTYQSSKD 793

  Fly  1225 DEVRKKAAS-TYLVEGSDMPPPRYQKDGTLPVI----------------YPNNVVNACTLPH--- 1269
            ||:.....| |.:..||.....:.|..|.:.|:                :|:.::.. ||||   
  Fly   794 DELHYAELSLTNMPSGSSGASKKGQPMGGVGVVQHVVQQQQQQQQGQVQHPHQLLGG-TLPHGSS 857

  Fly  1270 --------------PRHNNGSAAIHMTRDDQMLISKGVYIPSPSPAPPPDGSYYNMNSDRYLSYP 1320
                          .||...:.              |:..|. ..||||...|            
  Fly   858 MRKLLPTIPATATLQRHKPNAG--------------GMQHPH-QHAPPPTYDY------------ 895

  Fly  1321 PMEYPAALDFTAQPMPMAHLQPMTVTSLATNGGPTLIGNGSVAAVAGGSGTLRRGILRGVVGVPQ 1385
                    |:..:|...|.:.......:.|        ...||.|..|:|:   |:......:..
  Fly   896 --------DYFEEPTIYAQIDAYKTMQVDT--------GVVVAGVGAGAGS---GVNGAGASISS 941

  Fly  1386 PDVTHHT-STVGGSPMQMLHDLHPVNLSASTLTTSTTLNGSLPTATATLPRQPHGILKDPN---- 1445
            |. :|.| |||....:||.                            |||:.|.|....|:    
  Fly   942 PG-SHGTPSTVSPGTVQMY----------------------------TLPQHPGGYHTLPHNHHA 977

  Fly  1446 ------------------RNKQQQQQQ----------------QQQQQQQQLQHQQQLLNASLVG 1476
                              :.:||||||                ||||||||:.|.|.|::::..|
  Fly   978 QQQMAGGPQNSASMMQMMQQQQQQQQQMHHHPASNMPPSYQQHQQQQQQQQMAHGQMLVSSNSSG 1042

  Fly  1477 VG---VPVSAPLGSLQILNLPPASGGLGNN 1503
            :.   ..|::|..||..|:      |:|.:
  Fly  1043 LASTTAAVASPSSSLSGLS------GVGKS 1066

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 Ig 73..170 CDD:472250
Ig strand B 89..93 CDD:409559
Ig strand C 101..105 CDD:409559
Ig strand E 130..138 CDD:409559
Ig strand F 148..153 CDD:409559
Ig 173..279 CDD:472250
Ig strand B 196..200 CDD:409418
Ig strand C 210..214 CDD:409418
Ig strand E 241..245 CDD:409418
Ig strand F 255..260 CDD:409418
Ig strand G 272..275 CDD:409418
Ig_3 285..361 CDD:464046 21/90 (23%)
Ig 377..>457 CDD:472250 11/83 (13%)
Ig strand B 397..401 CDD:409418 0/3 (0%)
Ig strand C 411..415 CDD:409418 1/3 (33%)
Ig strand E 440..444 CDD:409418 0/3 (0%)
Ig 477..560 CDD:472250 29/102 (28%)
Ig strand B 499..504 CDD:409418 0/4 (0%)
Ig strand C 514..518 CDD:409418 1/3 (33%)
Ig strand E 537..541 CDD:409418 0/3 (0%)
Ig strand F 551..556 CDD:409418 2/4 (50%)
Ig 584..666 CDD:472250 21/81 (26%)
Ig strand B 595..599 CDD:409416 1/3 (33%)
Ig strand C 609..613 CDD:409416 1/3 (33%)
Ig strand E 636..642 CDD:409416 2/5 (40%)
Ig strand F 652..657 CDD:409416 1/4 (25%)
Ig strand G 667..670 CDD:409416 1/3 (33%)
Ig 678..767 CDD:472250 21/96 (22%)
Ig strand B 696..700 CDD:409353 0/3 (0%)
Ig strand C 710..714 CDD:409353 0/3 (0%)
Ig strand E 733..737 CDD:409353 2/3 (67%)
Ig strand F 747..752 CDD:409353 2/4 (50%)
Ig_3 772..847 CDD:464046 12/75 (16%)
Ig 881..963 CDD:472250 18/83 (22%)
Ig strand B 885..888 CDD:409353 0/2 (0%)
Ig strand C 897..901 CDD:409353 0/3 (0%)
Ig strand E 929..933 CDD:409353 0/3 (0%)
Ig strand F 943..948 CDD:409353 1/4 (25%)
FN3 967..1051 CDD:238020 20/89 (22%)
side-VINP_001036705.1 IG_like 35..140 CDD:214653 31/198 (16%)
Ig_3 165..230 CDD:464046 22/71 (31%)
Ig 262..343 CDD:472250 24/83 (29%)
Ig strand B 266..270 CDD:409416 1/3 (33%)
Ig strand C 280..284 CDD:409416 1/3 (33%)
Ig strand F 320..325 CDD:409416 1/4 (25%)
Ig strand G 336..339 CDD:409416 1/2 (50%)
Ig_3 358..426 CDD:464046 16/71 (23%)
Ig_3 456..524 CDD:464046 27/167 (16%)
FN3 545..622 CDD:473895 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.

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