DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sns and plum

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_001163744.1 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster


Alignment Length:1500 Identity:286/1500 - (19%)
Similarity:497/1500 - (33%) Gaps:440/1500 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 IYNLRISNASINDDA--DYQCQVGPARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQD 195
            ||:........|:.|  :|.|::   ..:.:...:.::||..|.......|....:.:...||:.
  Fly   117 IYDNGTLRLPTNEKASGEYYCKI---EWDESAVISDRITVEYPVLKRLFPGQQQAANISALENKP 178

  Fly   196 LQLKCIVANAKPAAQIVWYRGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQA 260
            |.|.|...:. |||:..||.||         |::....:....|..:|.|:....:...:|.|.|
  Fly   179 LVLSCPFLSV-PAARFSWYFGN---------DSLTNDNSALILTNGTLILRHLRLEQAGKYKCVA 233

  Fly   261 RHKALSPDMPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNPPAQLIWYKNGS 325
            ::.                            .|.:|.|                  |.||     
  Fly   234 QNT----------------------------FASKTHR------------------QFIW----- 247

  Fly   326 QIRMAYRTSGRLSENIYTFTAEAGDNKARFRCEASNVMSQNPLKAEVELSVLFAPTHVTVMGPTE 390
            |:::..:.:....:|      |||..:        ..:|:..|....:.:.:|.|...:|:....
  Fly   248 QLQVEPKDATFYPKN------EAGITE--------TAVSEAQLLPAFQNATVFVPAGGSVLLQCH 298

  Fly   391 ARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVRNATSKTIVSPEGGWTTTSNITAVVEPNKRSLVV 455
            | |.|.||:.....|.|          .:.||.:.:....|       .:|.:......:.|.:.
  Fly   299 A-VADFVPIVWYLQPPN----------NKMVRLSNNSVAYS-------ITNASIARHEGRYSCIT 345

  Fly   456 ICHGLNMQLTENVVSTHTINVLYPPAPPLISGYMEGQIIPAGSVQKLLCVSSGGNPLATLTWYKN 520
            .....|.|:   :|:|          ||.|...:..:::..|..:.|.| .:.|:|..::|||.|
  Fly   346 PLETQNFQV---IVTT----------PPRIVSRLPVEVVYIGLSRTLTC-RAEGHPEPSITWYHN 396

  Fly   521 DKRINSVIRAADKSVSA-EITILANVSDNQAQYRCEASNSATEIPLFQSTTLSVHFAPETVKIRI 584
            ...:||   :..:.:|. |:.:.:..|..:..|:|.|.|.|.|    .|.|..:.|..:.     
  Fly   397 GVHLNS---SYTRYISGNELHVHSFDSKEEGIYQCVARNVAGE----DSATGELRFNRQL----- 449

  Fly   585 EPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMN 649
              ||:.|  ...|.|...|               ...||.|     :.....|..|.|.:.:. |
  Fly   450 --EEVNP--LQNIRCYPHS---------------FHSINIT-----FDSRTLTSMFVVYIVRN-N 489

  Fly   650 GQVYTCQSANEALQRSAHEAVSLDV-LYRP-----KFVPPPSSTAVG--VEGESLQVSLQTRANP 706
            ...:|..|..: |.::::..:|.|: :|.|     :.:.|.:....|  |..:.:..||::    
  Fly   490 PHSWTSFSPMK-LNQTSYVVISTDLPVYEPFALITRVLFPTTEVRTGTLVPQQMILSSLRS---- 549

  Fly   707 TPVT------------------YKWTKDGTTIPQDGDHRIFADGGSLNFTRLHRDDAGIYSCSAS 753
            ||||                  .||::.     |..:.:.|....|:|.|..|         .|.
  Fly   550 TPVTCCTQGLMLRPIAVGNDTFVKWSQG-----QLENKKYFILQFSINHTHPH---------PAQ 600

  Fly   754 NSQGGATLNITVVVEYGTTIK-SVSENIVVNPGEDAMLSCTVEGKP-LTEEHVKWERVGYDMTVK 816
            ...|.....:|.|.|....:: .::|...:|....|.:...||.:. :.::.::.|...:.:.|.
  Fly   601 LLNGSLQGTLTSVEEKADQVRHHLTEIQPLNQSAAATVLRNVEHEDNVVDDTLELEDDIFSLVVD 665

  Fly   817 TSTTFANGTSYLHIK------DAKREDVG-NFRCVADNRVDNPT----NRDILLIVKFAPEIAKT 870
            .|.|......:..||      ..:.|.:| :||.|....::|.|    |....|:.:.:..:|  
  Fly   666 ASVTGILLQRFTRIKMRVLIITTENEFLGQDFRYVQWKIIENGTSEQSNMPFRLVTRESRALA-- 728

  Fly   871 PTLLRAASGTGERGRLPCRAQGSPKPQFIWRQDKKDLPINRTYKYEVEERKIDSLTYESTLIVDK 935
               .:......|...|.|..:         .|.:..||   :...:.::|.|.:    |.|:|..
  Fly   729 ---FKFLDSLNETCVLECHTE---------IQAQMSLP---SQDPKCQDRNIAN----SLLLVTG 774

  Fly   936 VAP-ADYGA--YECVARNELGEAVETVRLEITSQPDPPLSL-NILNVTHDTVTLAWTPGFD-GGL 995
            :.| ..|..  |.|..|...|:      ::..::.|||.:: |...:..:.:.|.|.|..: .|.
  Fly   775 LKPDTRYNLHFYNCKTRIFYGD------IDEKTEQDPPGTISNSKLIKQNGLKLMWEPPINPNGR 833

  Fly   996 KASYRVRYRM-----------ADREQYKYIDGLPN---SHKLTIGGLRMNTLYLFSVMSWNELGQ 1046
            ...|.:|:.:           ..:..||:    ||   :.|:.:.         ..||.....|.
  Fly   834 VHHYDIRWSLDNVTHEAIVKECTKCSYKF----PNVSETAKIHVA---------VRVMGDTGAGA 885

  Fly  1047 SSYLPDLARAET--KEAPPPSHPASSLGGGPPTTSQTPLGGTSGMLLVGVGAGIVVVLLNVFVIG 1109
            ..|...:....|  ||....||            |:...|...|.||    :...|.|..:|:| 
  Fly   886 PMYFDMINNNHTWLKEESESSH------------SEVYSGIAIGSLL----SIACVFLFGLFII- 933

  Fly  1110 CCLHKRNEKRLKRGLELMPAELTEDSSNTPNLVIIGISLAAFGFLLVNASLVAWFFVHQRRKKVA 1174
              ..:||.|...:|    |..||     ||..:..|...:|.|.                     
  Fly   934 --FQQRNFKARAQG----PTHLT-----TPTDINFGNLSSASGM--------------------- 966

  Fly  1175 ETTNQPAKTATIEMYAPSSYNDTVTGETLSSVSEKSES------YSNEGSSQPEYIDEVRKKAAS 1233
                            |......::|.||.....:.::      |..|  ..||:..|.:...|:
  Fly   967 ----------------PGDSAGGLSGGTLQQDCHEMQTLIPRSRYHIE--LLPEHSLEYQTSTAA 1013

  Fly  1234 TYLV-----EGSDMPPPRYQKDGT----LPVIYPNNV--VNACTLPHPRHNNGSAAIHMTRDDQM 1287
            ..:|     .||.....|..:||.    |.:...:|:  :..|.:      .|::....|..|.|
  Fly  1014 VAVVHLANGNGSVQVARRSDQDGAAQGDLGIAGVHNLSQLPLCGV------GGTSPERKTVQDAM 1072

  Fly  1288 L-ISKGVYIPSPSPAPPPDGSYYNMNSDRYLSYPPMEYPAALDFTAQP--MPMAHLQPMTVTSLA 1349
            | .:|..|||...  .||:.  ..::|.:..:.|.   .:.|:....|  :|:....|       
  Fly  1073 LQEAKAFYIPYRH--TPPNA--VALSSSKQCAVPS---GSELEVIVPPNSLPLVTTMP------- 1123

  Fly  1350 TNGGPTLIGNGSVAAVAGGSGTLRRGILRGVVGVPQPDVTHHTSTVGGSPMQMLHD--------- 1405
               |..::|.|.......|..:.|.|.|..         :..:|:..||..:..|.         
  Fly  1124 ---GLGVVGGGGSGGGGVGGSSRRSGSLSS---------SSASSSSNGSSKKQFHTNFVRHSNSN 1176

  Fly  1406 ----LHPVNLSASTLTTST--------TLNG-SLPTATATLPRQPHGILKDPNRNKQQQQQQQQQ 1457
                |.....:|:|||.::        ..|| .||   |.:.:...|.....|.|.......|:.
  Fly  1177 DGIYLLAEEEAAATLTPTSEREYAAVCLTNGFKLP---ADVAKSGGGTYNTTNNNNSSTNTSQKS 1238

  Fly  1458 QQQQQLQHQQQLLNASLVGVGVPVSAPLGSLQILNLPPASGGLGNNLLMTTNAFDPTTVGLSSFG 1522
            ...::.|.:         |.|.|:|....:.::    ||:|              |.:|.::...
  Fly  1239 ATAKERQPR---------GNGNPISFSHNACKV----PANG--------------PASVNVNHSS 1276

  Fly  1523 AVSQA 1527
            ||.|:
  Fly  1277 AVKQS 1281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 6/38 (16%)
Ig 76..155 CDD:299845 6/23 (26%)
IG_like 186..279 CDD:214653 19/92 (21%)
Ig 197..279 CDD:299845 16/81 (20%)
IG_like 296..376 CDD:214653 12/79 (15%)
Ig 300..361 CDD:299845 8/60 (13%)
Ig 380..454 CDD:299845 14/73 (19%)
IG_like 490..573 CDD:214653 22/83 (27%)
Ig 501..560 CDD:299845 17/59 (29%)
Ig 584..666 CDD:299845 16/81 (20%)
IG_like 585..666 CDD:214653 16/80 (20%)
I-set 678..767 CDD:254352 21/113 (19%)
IGc2 692..757 CDD:197706 15/82 (18%)
Ig 788..849 CDD:143165 14/68 (21%)
Ig 885..960 CDD:143165 16/77 (21%)
FN3 967..1051 CDD:238020 19/99 (19%)
plumNP_001163744.1 IG_like 170..241 CDD:214653 20/108 (19%)
IGc2 175..235 CDD:197706 19/69 (28%)
IG_like 284..356 CDD:214653 17/92 (18%)
I-set 360..443 CDD:254352 24/90 (27%)
IGc2 378..435 CDD:197706 17/60 (28%)
FN3 804..886 CDD:238020 18/94 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11640
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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