DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and il1rl1

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_021334743.1 Gene:il1rl1 / 407649 ZFINID:ZDB-GENE-060621-4 Length:471 Species:Danio rerio


Alignment Length:522 Identity:102/522 - (19%)
Similarity:167/522 - (31%) Gaps:174/522 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   610 LSWWKDGIPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMNGQVYTCQSANEALQRSAHEAVSLDV 674
            :::|:|.   ||              |..||..::.                    .||..|.|:
Zfish    35 ITYWRDA---EG--------------SCSEFETDIV--------------------VHENFSRDL 62

  Fly   675 LYRPKFVPPPSSTAVGVEGESLQVSLQTRANPTPVTYKWTKDGTTIPQDGDHRIFADGGSLNFTR 739
            ||.              :.|:.::......| .|.::.|.||.|.||....       .||....
Zfish    63 LYG--------------KTENSEIICPICKN-QPGSFIWYKDFTLIPNQSK-------SSLRIRN 105

  Fly   740 LHRDDAGIYSCSASNSQGGATLNIT-----VVVEYGTTIK-----SVSENIV-VNPGEDAMLSCT 793
            :.::..|||:|..:....|...|.:     |:.|....|.     .::.:|| .|.|.:.:|:|:
Zfish   106 ISKESQGIYTCVCTWDHHGIKYNTSGSRELVIKEKTVRIPPQFRLPINNSIVNTNIGAEMLLNCS 170

  Fly   794 VEGKPLTEE--HVKWER--------VGYDMTVKTSTTFANGTSYLHIKDAKREDV-GNFRCVADN 847
            |....:..:  .|.||:        .||:.....:..||:  |.|:|......|: ..|.|.|  
Zfish   171 VLFGTVVCDFCSVHWEKNGIKVNKMKGYEEKYSKNGGFAH--SLLNITAVSELDLQSKFHCAA-- 231

  Fly   848 RVDNPTNRDILLIVKFAPEIAKTP-------TLLRAASGT------------------------- 880
             :|......:|:.:|..|.:....       |:|...:||                         
Zfish   232 -MDEYGVIYVLVTLKREPSVLTVVLVFIFIFTVLLLFAGTVRWFALDLVLLARKLFIKLYRTEDG 295

  Fly   881 ---------------GERGR----------LPCRAQGSPKPQFIWRQDKKDLP------INRTYK 914
                           ||.|.          ||..........||..:|  |||      :.:| |
Zfish   296 KLYDAYVIYQRSGLDGETGHAVSEFVNGALLPVLESSCGYKLFIHGRD--DLPGEDSANLIQT-K 357

  Fly   915 YEVEERKIDSLTYESTLIVDKVAPADYGAYECVARNELGEAVETVRLEITSQPDPPLSLNILNVT 979
            .::..|.:..|:.|......:......|.::.:.:.|  ..|..::|.: .|....|.|.:.::.
Zfish   358 IQLSRRLLIILSAEGVGGSAEAYDLQAGLHQALVQGE--TPVIIIQLGL-MQDYSHLPLGLQHLL 419

  Fly   980 HDTVTLAWTPGFDGGLKASY--RVRYRMADREQYKYIDGLPNSHKLTIGGLRMNTLYLFSVMSWN 1042
            .....|.|..| :..|.:.:  ||||||.             :...||.|.|.:....|   .|.
Zfish   420 RKRSALLWRDG-EASLNSRFWKRVRYRMP-------------AASATIRGSRASNTAAF---HWQ 467

  Fly  1043 EL 1044
            .|
Zfish   468 SL 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845 7/55 (13%)
IG_like 585..666 CDD:214653 7/55 (13%)
I-set 678..767 CDD:254352 18/93 (19%)
IGc2 692..757 CDD:197706 15/64 (23%)
Ig 788..849 CDD:143165 17/71 (24%)
Ig 885..960 CDD:143165 16/90 (18%)
FN3 967..1051 CDD:238020 19/80 (24%)
il1rl1XP_021334743.1 PHA02785 <19..231 CDD:333475 53/256 (21%)
Ig 67..139 CDD:325142 18/79 (23%)
TIR 298..447 CDD:214587 32/155 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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