Protein Alignment sns and Cadm4

DIOPT Version :9

• Sequence 1: NP_001036532.1
• Gene: sns / 44097
• FlyBaseID: FBgn0024189
• Length: 1542
• Species: Drosophila melanogaster
• Sequence 2: NP_001040572.1
• Gene: Cadm4 / 365216
• RGDID: 1304722
• Length: 388
• Species: Rattus norvegicus
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sns	NP_001036532.1	I-set	73..170	CDD:254352
		Ig	76..155	CDD:299845
		IG_like	186..279	CDD:214653
		Ig	197..279	CDD:299845
		IG_like	296..376	CDD:214653
		Ig	300..361	CDD:299845
		Ig	380..454	CDD:299845
		IG_like	490..573	CDD:214653
		Ig	501..560	CDD:299845
		Ig	584..666	CDD:299845
		IG_like	585..666	CDD:214653
		I-set	678..767	CDD:254352
		IGc2	692..757	CDD:197706
		Ig	788..849	CDD:143165
		Ig	885..960	CDD:143165
		FN3	967..1051	CDD:238020
Cadm4	NP_001040572.1	Ig	29..120	CDD:416386
		FR1	29..45	CDD:409353
		Ig strand A'	30..36	CDD:409353
		Ig strand B	38..46	CDD:409353
		CDR1	46..51	CDD:409353
		FR2	52..59	CDD:409353
		Ig strand C	52..58	CDD:409353
		CDR2	60..71	CDD:409353
		Ig strand C'	62..66	CDD:409353
		Ig strand C'	68..71	CDD:409353
		FR3	72..107	CDD:409353
		Ig strand D	76..83	CDD:409353
		Ig strand E	86..92	CDD:409353
		Ig strand F	99..107	CDD:409353
		CDR3	108..111	CDD:409353
		Ig strand G	111..120	CDD:409353
		FR4	113..120	CDD:409353
		IgI_2_Necl-4	121..220	CDD:409468
		Ig strand B	141..145	CDD:409468
		Ig strand C	155..159	CDD:409468
		Ig strand E	182..186	CDD:409468
		Ig strand F	196..201	CDD:409468
		Ig strand G	213..216	CDD:409468
		Ig strand A'	231..235	CDD:409353
		IGc2	237..298	CDD:197706
		Ig strand B	241..248	CDD:409353
		Ig strand C	255..260	CDD:409353
		Ig strand C'	262..264	CDD:409353
		Ig strand E	274..280	CDD:409353
		Ig strand F	287..294	CDD:409353
		Ig strand G	300..308	CDD:409353
		4.1m	344..362	CDD:128590

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910