DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and dpr1

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster


Alignment Length:293 Identity:63/293 - (21%)
Similarity:104/293 - (35%) Gaps:71/293 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 HWIKHLQLLRLLAVIVL-----ASAPVPSHAQQQKFRTT----------PHDLQVLEGAEAMMRC 93
            :|:  :..|.||::::|     |.||.|..........:          |.:|.|..|....:.|
  Fly    13 NWL--IGWLLLLSMVLLRGYNAALAPTPPTTSTTTISPSNLLPYFDFDVPRNLTVTVGQTGFLHC 75

  Fly    94 EVANV-----------------AGAVQWTKDGFALGFSAVIPGFPRYSVLGDRKQGIYNLRISNA 141
            .|..:                 ||...:|.|             .|:.||.......:.|:|...
  Fly    76 RVERLGDKDVSWIRKRDLHILTAGGTTYTSD-------------QRFQVLRPDGSANWTLQIKYP 127

  Fly   142 SINDDADYQCQVGPARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQLKC-IVANA 205
            ...|...|:||:     |:..:.:...|........||.|   .|.:.|:...|:.|.| |:...
  Fly   128 QPRDSGVYECQI-----NTEPKMSLSYTFNVVELKAEIFG---PSDLMVKTGSDINLTCKIMQGP 184

  Fly   206 KPAAQIVWYRGNVEYKPEKREDTVEESTAK-----RFT--TTSSLKLKPGPDDDYTEYTCQARHK 263
            .....|.||:|: |....|.|:.::.|.|:     .:|  .||.||:|.....|...|||     
  Fly   185 HELGNIFWYKGS-EMLDGKGENEIDSSMARIRVEDDWTDGLTSRLKIKRAMPGDTGNYTC----- 243

  Fly   264 ALSPDMPMRATVQLSVLYPPGPPYIEGYSAGET 296
              .|.:...::|.:.|:....|..::..|:..:
  Fly   244 --VPTVAKTSSVYVHVIIGEHPAAMQHNSSSNS 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 20/123 (16%)
Ig 76..155 CDD:299845 19/105 (18%)
IG_like 186..279 CDD:214653 27/100 (27%)
Ig 197..279 CDD:299845 24/89 (27%)
IG_like 296..376 CDD:214653 0/1 (0%)
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
dpr1NP_001286645.1 Ig 59..154 CDD:299845 21/112 (19%)
IG_like 60..150 CDD:214653 20/107 (19%)
IG_like 163..257 CDD:214653 27/101 (27%)
Ig 174..244 CDD:143165 22/77 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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