DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and Igsf10

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_001156356.1 Gene:Igsf10 / 242050 MGIID:1923481 Length:2594 Species:Mus musculus


Alignment Length:1131 Identity:247/1131 - (21%)
Similarity:413/1131 - (36%) Gaps:241/1131 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 HIKWQQHATK----RRRCRQHWIKHLQLLRLLAVIV---------LASAPVPSHAQQQKFRTTPH 79
            |...|:||.|    ::..:....|||....|...|:         .||..||::           
Mouse  1581 HWNAQRHAEKSVFDKKPAQNPTSKHLPYDSLPKTILKKPRIIGGKAASFTVPTN----------- 1634

  Fly    80 DLQVLEGAEAMMRCE-VANVAGAVQWTKDGFALGFSAVIPGFPRYSVLGDRKQGIYNLRISNASI 143
                   ::.::.|| |.:....:.||:.......|..|.. .|:.||.:.     .|.|...||
Mouse  1635 -------SDVLLPCEAVGDPKPTIHWTRVSSGREISRGIQK-TRFHVLPNG-----TLSIQRVSI 1686

  Fly   144 NDDADYQCQV-GPARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQLKCIVANAKP 207
            .|...|.|.. .|..::   ..:..|:|:|.||.|.   .||..::.......::|||.| ...|
Mouse  1687 QDRGQYLCAASNPLGVD---HLHVTLSVVSYPARIL---ESHVKEITAHSGSTVKLKCRV-EGMP 1744

  Fly   208 AAQIVWYRGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDD----------DYTEYTCQARH 262
            ...|.|...|        :..|.|      |...|.|:...||.          |...|.|.|. 
Mouse  1745 RPTISWILAN--------QTVVSE------TPEGSRKVWVTPDGTLIIHNLSLYDRGFYKCVAN- 1794

  Fly   263 KALSPDMPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNPPAQLIW-YKNGSQ 326
               :|.......|::.|:..| |..||..........|::::|.|.:: |.|...:.| ..:|::
Mouse  1795 ---NPSGQDSLLVKIQVITAP-PVIIEQKRQAIVGVLGESLKLPCTAK-GTPQPSVHWVLYDGTE 1854

  Fly   327 IRMAYRTSGRL---------SENIYTFTAEAGDNKARFRCEASNVMSQNPLKAEVELSVLFAPTH 382
            ::....|..|.         ..||.:..      :..:.|.|::...     :|..:.:|.....
Mouse  1855 LKPLQLTHSRFFLYPNGTLYIRNIVSSV------RGTYECIATSSSG-----SERRVVILRVEEQ 1908

  Fly   383 VTVMGP---------TEARVGDIVPLTCTTAPSNPPAEIKWMVGGR----QVRNATSKTIVSPEG 434
            .||  |         ||..:|:.:.|.| :|..:|...|.|.:..:    |.....|:..|.|.|
Mouse  1909 ETV--PRIETASQKWTEVNLGEKLLLNC-SATGDPKPTIIWKLPSKVVIDQWHRMGSRIHVYPNG 1970

  Fly   435 GWTTTSNITAVVEPNKRSLVVICHGLNMQLTENVVSTHTINVLYPPAPPLISGYMEGQIIPAGSV 499
            ...    |.:|.|.:....:.:...   ::.:::|..| :.:...||......:.:.|::.....
Mouse  1971 SLV----IGSVTEKDGGDYLCVARN---KMGDDLVLMH-VRLRLTPAKIEHKQHFKKQVLHGKDF 2027

  Fly   500 QKLLCVSSGGNPLATLTWYKNDKR-INSVIRAADKSV-SAEITILANVS--------DNQAQYRC 554
            | :.|.:| |:|:..::|...|.. :|:|.:|.|... :...|:..|.:        ..:..|.|
Mouse  2028 Q-VDCKAS-GSPVPEVSWSLPDGTVVNNVAQADDSGYRTKRYTLFHNGTLYFNKVGMAEEGDYIC 2090

  Fly   555 EASNSATEIPLFQSTTLSVHFAPETVKIRIEPE-----ELRPGMEATIICDSSSSNPPAKLSWWK 614
            .|.|:      .....:.||....|...||...     .::.|..|.:.|: .:..|...:.|..
Mouse  2091 SAQNT------LGKDEMKVHLTVLTAIPRIRQNYRSNVRIKAGDTAVLDCE-VTGEPKPNVFWLL 2148

  Fly   615 DGIPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMNGQVYTCQSANEALQRSAHEAVSLDVLYRPK 679
            ....:...:|........||:|     :|..:.::...|.|.:.|.:...:  :...||::.||.
Mouse  2149 PSNNVISFSNDRFIFHANGTLS-----INKVKPLDSGKYVCVAQNPSGDDT--KTYKLDIVSRPP 2206

  Fly   680 FVPPPSSTAVGVEGESLQVS---LQTRAN---PTPVTYKWTKDGT---TIPQDGDHRIFADGGSL 735
            .:....:....::..::|.|   |..||:   |..:|  |.....   |.|..|........|:|
Mouse  2207 LINGLYANKTVIKATAIQHSKKHLDCRADGVPPPQIT--WIMPDNIFLTAPYYGGRITVHQNGTL 2269

  Fly   736 NFTRLHRDDAGIYSCSASNSQGGAT-----LNITVVVEYGTTIKSVSENIVVNPGEDAMLSCTVE 795
            ....:...|:..::| ...|:||.:     |.:..::...|.....:|.:|...|:...::|:|:
Mouse  2270 EIRNIRLSDSADFTC-VVRSEGGESVLVVQLKVLEMLRRPTFRNPFNEKVVAQVGKPVAMNCSVD 2333

  Fly   796 GKPLTEEHVKWERVGYDMTVKTSTTFANG---TSYLH-------IKDAKREDVGNFRCVADNRVD 850
            |.|..|  :.|       .:...|.||||   :.||.       :..|.|...|.:||.|.|:| 
Mouse  2334 GNPTPE--IIW-------ILPDGTQFANGPQNSPYLMASNGSLIVYKATRNKSGKYRCTARNKV- 2388

  Fly   851 NPTNRDILLIVKFAPEIAKTPTLLRAASGT-----GERGRLPCRAQGSPKPQFIWRQDKKDLPIN 910
            ....:.|||      ||.:.|.:|....|.     ||...|.|.:.|.|||...| .....|.|:
Mouse  2389 GYIEKLILL------EIGQKPVILTYEPGMIKSAGGESLSLHCVSDGIPKPNVKW-TTPGGLVID 2446

  Fly   911 RTY---KYEVEERKIDSLTYESTLIVDKVAPADYGAYECVARNELGEAVETVRLEITSQPDPPLS 972
            |..   ||.:.|        ..||::.:....|.|.|.|.|:|.:|:||.:|.:.|.:.  ||..
Mouse  2447 RPQVGGKYILHE--------NGTLVIKETTAHDRGNYICKAQNSVGQAVISVPVTIVAY--PPRI 2501

  Fly   973 LN-----ILNVTHDTVTL------------AW-TPGFDGGLKASYRVRYRMADREQYKYIDGLPN 1019
            :|     :|..|.:.:.|            .| |||:.....|:.|..:|.         :.||.
Mouse  2502 INYLPRSMLRRTGEAMQLHCVALGVPKPQITWETPGYSLLSTATERRPHRS---------EMLPL 2557

  Fly  1020 SHKLTIGGLRMNTLYLFSVMSWNELG 1045
            ...|.|..||.:...::...:.|.||
Mouse  2558 QGTLVIQNLRASDSGVYKCRAQNVLG 2583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 19/98 (19%)
Ig 76..155 CDD:299845 17/80 (21%)
IG_like 186..279 CDD:214653 21/102 (21%)
Ig 197..279 CDD:299845 21/91 (23%)
IG_like 296..376 CDD:214653 14/89 (16%)
Ig 300..361 CDD:299845 13/70 (19%)
Ig 380..454 CDD:299845 20/86 (23%)
IG_like 490..573 CDD:214653 18/92 (20%)
Ig 501..560 CDD:299845 16/68 (24%)
Ig 584..666 CDD:299845 14/86 (16%)
IG_like 585..666 CDD:214653 13/85 (15%)
I-set 678..767 CDD:254352 20/102 (20%)
IGc2 692..757 CDD:197706 16/73 (22%)
Ig 788..849 CDD:143165 20/70 (29%)
Ig 885..960 CDD:143165 24/77 (31%)
FN3 967..1051 CDD:238020 22/97 (23%)
Igsf10NP_001156356.1 LRRNT 29..60 CDD:214470
leucine-rich repeat 39..58 CDD:275380
LRR 1 58..79
leucine-rich repeat 59..82 CDD:275380
LRR_8 82..141 CDD:338972
LRR 2 82..103
leucine-rich repeat 83..106 CDD:275380
LRR 3 106..127
leucine-rich repeat 107..130 CDD:275380
LRR_8 130..195 CDD:338972
LRR 4 130..151
leucine-rich repeat 131..154 CDD:275380
LRR <152..402 CDD:227223
LRR 5 154..175
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..210 CDD:275380
LRR 6 186..207
LRR_4 187..>220 CDD:378953
LRRCT 219..276 CDD:214507
IG_like 485..568 CDD:214653
IG_like 583..662 CDD:214653
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 670..725
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 963..1008
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1228..1251
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1333..1364
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1428..1457
Ig 1637..1708 CDD:319273 18/79 (23%)
LRR 11 1658..1681 6/28 (21%)
Ig 1734..1805 CDD:319273 20/89 (22%)
Ig_3 1813..1891 CDD:372822 15/84 (18%)
Ig_3 1912..1991 CDD:372822 18/83 (22%)
IG 2024..2107 CDD:214652 19/90 (21%)
I-set 2120..2199 CDD:369462 13/86 (15%)
Ig 2230..2298 CDD:319273 16/70 (23%)
Ig_3 2308..2386 CDD:372822 23/86 (27%)
Ig_3 2403..2481 CDD:372822 25/86 (29%)
IG 2506..2593 CDD:214652 19/87 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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