DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and Iglon5

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_001157990.1 Gene:Iglon5 / 210094 MGIID:2686277 Length:336 Species:Mus musculus


Alignment Length:328 Identity:83/328 - (25%)
Similarity:130/328 - (39%) Gaps:58/328 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   684 PSSTAVGVEGESLQVSL-----QTRA---NPTPVTY----KWTKDG-----TTIPQDGDHRIFAD 731
            |:......||::..:|.     .||.   |.:.:.|    :||.|.     ...|::        
Mouse    38 PADNYTVCEGDNATLSCFIDEHVTRVAWLNRSNILYAGNDRWTSDPRVRLLINTPEE-------- 94

  Fly   732 GGSLNFTRLHRDDAGIYSCSASNSQGGATLNITVVVEYGTTIKSVSENIVVNPGEDAMLSCTVEG 796
             .|:..|::...|.|:|:||........|..:.::|.....|.::|..:.||.|.:..|.|...|
Mouse    95 -FSILITQVGLGDEGLYTCSFQTRHQPYTTQVYLIVHVPARIVNISSPVAVNEGGNVNLLCLAVG 158

  Fly   797 KPLTEEHVKWERVGYDMTVKTSTTFANGTSYLHIKDAKREDVGNFRCVADNRVDN-PTNRDILLI 860
            :|  |..|.|.::        ...|.:....|.|.|.:|...|.:.||..|.|:: |.:|.:|:.
Mouse   159 RP--EPTVTWRQL--------RDGFTSEGEILEISDIQRGQAGEYECVTHNGVNSAPDSRRVLVT 213

  Fly   861 VKFAPEIAKTPTLLRAASGTGERGRLPCRAQGSPKPQFIWRQDKKDLPINRTYKYEVEERKIDSL 925
            |.:.|.|....:   |.:..|....|.|.|...|...|.|.:|.:.|...     ..|..|:.:.
Mouse   214 VNYPPTITDVTS---ARTALGRAALLRCEAMAVPPADFQWYKDDRLLSSG-----SAEGLKVQTE 270

  Fly   926 TYESTLIVDKVAPADYGAYECVARNELGEAVETVR------LEITSQPDPPLSLNILNVTHDTVT 984
            ...|.|:...|:...||.|.|.|.|.||.:..::|      || .|.|.||..|.:|:      .
Mouse   271 RTRSMLLFANVSARHYGNYTCRAANRLGASSASMRLLRPGSLE-NSAPRPPGPLTLLS------A 328

  Fly   985 LAW 987
            |:|
Mouse   329 LSW 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352 20/99 (20%)
IGc2 692..757 CDD:197706 18/81 (22%)
Ig 788..849 CDD:143165 16/60 (27%)
Ig 885..960 CDD:143165 21/74 (28%)
FN3 967..1051 CDD:238020 7/21 (33%)
Iglon5NP_001157990.1 Ig 41..129 CDD:416386 19/96 (20%)
Ig strand A' 41..46 CDD:409353 0/4 (0%)
Ig strand B 48..56 CDD:409353 1/7 (14%)
CDR1 56..60 CDD:409353 0/3 (0%)
FR2 61..68 CDD:409353 2/6 (33%)
Ig strand C 61..67 CDD:409353 2/5 (40%)
CDR2 69..79 CDD:409353 1/9 (11%)
Ig strand C' 71..74 CDD:409353 0/2 (0%)
Ig strand C' 76..79 CDD:409353 0/2 (0%)
FR3 80..115 CDD:409353 10/43 (23%)
Ig strand D 84..91 CDD:409353 0/6 (0%)
Ig strand E 94..100 CDD:409353 1/14 (7%)
Ig strand F 107..115 CDD:409353 4/7 (57%)
CDR3 116..120 CDD:409353 0/3 (0%)
Ig strand G 120..129 CDD:409353 1/8 (13%)
FR4 122..129 CDD:409353 1/6 (17%)
Ig strand A 132..137 CDD:409353 1/4 (25%)
Ig_3 134..199 CDD:404760 20/74 (27%)
Ig strand A' 140..145 CDD:409353 0/4 (0%)
Ig strand B 148..157 CDD:409353 2/8 (25%)
Ig strand C 163..167 CDD:409353 1/3 (33%)
Ig strand D 174..177 CDD:409353 0/2 (0%)
Ig strand E 178..183 CDD:409353 1/4 (25%)
Ig strand F 191..199 CDD:409353 3/7 (43%)
Ig_3 217..295 CDD:404760 22/85 (26%)
putative Ig strand A 218..224 CDD:409353 2/5 (40%)
Ig strand B 234..238 CDD:409353 1/3 (33%)
Ig strand C 247..251 CDD:409353 1/3 (33%)
Ig strand E 274..278 CDD:409353 2/3 (67%)
Ig strand F 288..293 CDD:409353 2/4 (50%)
Ig strand G 301..304 CDD:409353 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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