DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sns and syg-2

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_001309674.1 Gene:syg-2 / 181561 WormBaseID:WBGene00007750 Length:1230 Species:Caenorhabditis elegans


Alignment Length:1365 Identity:359/1365 - (26%)
Similarity:583/1365 - (42%) Gaps:238/1365 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 HAQQQKFRTTPHDLQVLEGAEAMMRCEVANVAGAV---QW-TKDGFALGF--SAVIPGFP-RYSV 125
            |...|.|..:|.:|..:.|.....||........:   || :..|..||:  ..::||.. |:|.
 Worm    15 HISSQFFLESPSNLSTIAGESITFRCSAEKSPEPIVYSQWKSNTGSLLGYHQEGILPGHQGRFSY 79

  Fly   126 LGDRKQGIYNLRISNASINDDADYQCQV-----GPARLNSAIRANAKLTVISPPASIEIKGYSHN 185
            :....:.:: |:|::.:::||.:|:||:     ||      |||.:.|.:|.||..:....|..|
 Worm    80 IKQNAEELH-LKITHVNLDDDGEYECQMLHPEEGP------IRAKSFLNIIVPPQLVYFSNYQPN 137

  Fly   186 SKVEVRENQDLQLKCIVANAKPAAQIVWYR-GNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGP 249
            |.:.|:||..|.:.|:|.|.||..:::||. |.|..:..|:..|...:  |.||..:||.::...
 Worm   138 SIIAVKENTPLNITCVVPNVKPEPEVLWYMDGKVMSRDVKQASTPHLN--KTFTVYTSLVVQSDR 200

  Fly   250 DDDYTEYTCQARHKALSPDMPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNP 314
            :|.....||:|..|  ..|:.:.....|.||:||..|.:|.......||.|..|.:.|...||||
 Worm   201 NDHGKVITCEAFQK--ETDIRITTNTTLDVLFPPSDPTVEILRNPSALRSGDNVTIACSVTGGNP 263

  Fly   315 PAQLIWYKNGSQIRMAYRTSGRLSE--NIYTFTAEAGDNKARFRCEASNVMSQNPLKAEVELSVL 377
            |..:.||....:::.......|..|  |||:|.|...||.|.:.|.|:|..:.||.:..::|.|.
 Worm   264 PPDVFWYHENKRLQSHSTLDTRSKEIKNIYSFIASQNDNMAEYECRANNSRTGNPKRKAMKLEVN 328

  Fly   378 FAPTHVTVMGPTEARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVRNATSKTIVSPEGGWTTTSNI 442
            :.|..|.:.|.:..|.|....:.|.:.||||.::|.|::.||.|...|.:..| .|.|..::||:
 Worm   329 YPPASVELFGESNIRYGSSANIQCKSLPSNPASQITWIINGRSVPTPTQREFV-VENGIVSSSNV 392

  Fly   443 TAVVEPNKRSLVVICHGLNMQLTE-----NVVSTHTINVLYPPAPPLISG-----YMEGQIIPAG 497
            :.    :...|.|..|.:|::...     :....|.|.::.||..|:|:|     :.||.|:   
 Worm   393 SV----HSNELSVEAHQINVECMATNPEGSSAKQHVIKIIAPPKAPIITGLEDRKFFEGDIV--- 450

  Fly   498 SVQKLLCVSSGGNPLATLTWY--------KNDKRIN-SVIRAADKSVS-----AEITILANVSDN 548
               .:.|.:.||||||.|:||        |..|::. |.:..|...|:     :.:.:..:.:.|
 Worm   451 ---NVTCEAQGGNPLAELSWYRGSEKHLVKGRKKMKWSQVNGAHNEVAGFSSYSTLALRVDRTMN 512

  Fly   549 QAQYRCEASNSATEIPLFQSTTLSVHFAPETVKIRIEP-----EELRPGMEATIICDSSSSNPPA 608
            ..:.:|||:|:|.:.||.:|..|||::.|..|.||  |     :.|..|..|.::|.:.||||.|
 Worm   513 TQRLKCEATNAALDEPLIESQYLSVYYPPRRVLIR--PADSGDQRLLVGKSARLVCGTLSSNPAA 575

  Fly   609 KLSWW--------KDGIPIEGINNTSKPGLWGGTV-STLEFRVNVTQEMNGQVYTCQSANEALQR 664
            .:||.        |..:....:|.|::..  |..| :.|.|  ..|:|.:|.|..|.:.:...:.
 Worm   576 HISWQFSRATDDNKVHLGDVSLNETTRDN--GFNVENVLSF--TPTEEYDGTVVHCIANHPEWKH 636

  Fly   665 SAHEAVSLDVLYRPKFVPPPSSTAVGVEGESLQVSLQTRANPTPVTYKWTKDGTTIPQDGDH--- 726
            |.:.:..|:|:|.||.:.....|.|..||:|.:.:|..|.||....::|.|:|...    ||   
 Worm   637 SVNTSFPLNVMYPPKMLVNDPVTVVMSEGDSFKENLTVRGNPAISLWQWRKNGVPF----DHTIG 697

  Fly   727 RIFADGGSLNFTRLHRDDAGIYSCSASNSQGGATLNITVVVEYGTTIKSVSENIVVNPGEDAMLS 791
            |:||.|..|:..:|...|||:|:.:|:||.|...:.|.:.|||...|.|:|..::...|:..:|.
 Worm   698 RVFARGAVLSGKQLLSTDAGVYTLTATNSVGSTNITIKLAVEYSARITSISTPVIAATGDTVLLE 762

  Fly   792 CTVEGKPLTEEHVKWERVGYDMTVKTSTTFANGTSYLHIKDAKREDVGNFRCVADNRVDNPTNRD 856
            |..:|:|.....:.|.:.|   .:..:....:..:.|.: :|..:..|.:.|.|||.:..|....
 Worm   763 CEADGEPSKANMIHWYKNG---EILAAQHRGHKKAILRL-NATEQQSGEYTCKADNGIGVPAEGQ 823

  Fly   857 ILLIVKFAPEIAKTPTLLRAASGTGERGRLPCRAQGSPKPQFIWRQDKKDLPINRTYKYEVEERK 921
            ..|:|..||.:.......:.|...|...:..|:....|..:|:|.:|::.:..|.: ||.:...:
 Worm   824 TFLLVNSAPRVLPVARYAKTAGILGGVAKARCKVYAVPTVEFVWEKDEQLIKKNSS-KYSIVNTQ 887

  Fly   922 IDSLTYESTLIVDKVAPADY-GAYECVARNELGEAVETVRLEITSQPDPPLSLNILNVTHDTVTL 985
            ||..||||||.:..:.|.|| ...:|:|||..|....::.:...:.||.|.:|.:.|.|.:|:::
 Worm   888 IDYSTYESTLWIKNIVPDDYTKKVKCIARNSFGTDHLSIPIIPPTHPDEPFNLTMTNSTLNTISV 952

  Fly   986 AWTPGFDGGLKASYRVRYRMADREQYKYIDGLPNSH-KLTIGGLRMNTLYLFSVMSWNELG-QSS 1048
            ||.|.||||....:.|:||   |:....|..:..:| .|.:.||.....|.|.:.|.|..| .||
 Worm   953 AWEPRFDGGSDQIFEVKYR---RQNDDLIHLVNTTHTNLRLSGLATANTYFFQIRSINARGFASS 1014

  Fly  1049 YLPDLARAETKEAPPPSHPASSLGGGPPTTSQTPLGGTSGMLLVGVGAGIVVVLLNVFVIGCCLH 1113
            :...:..|...|                                   .|:.|.::          
 Worm  1015 WTSPVIFATLNE-----------------------------------DGVNVAMI---------- 1034

  Fly  1114 KRNEKRLKRGLEL---MPAELTEDSSNTPNLVIIGISLAAFGFLLVNASLVAWFFVHQRRKKVAE 1175
             ||||     |:|   :|            .::|.|.|    |:|:|..:..:.....:::|:.|
 Worm  1035 -RNEK-----LKLTTWIP------------YILIFIVL----FMLLNVVICCFVCNRTKKRKLRE 1077

  Fly  1176 TTNQPAKTA-------TIEMYAPSSYNDTVTGETLSSVSEKSE---------SYSNEGSSQPEYI 1224
            .| :.|:||       .::||.....||.::...:....|.||         ..|..|..||   
 Worm  1078 KT-EMARTAINGGDVRQVQMYGTMMGNDGMSRRDIDDRPEMSEDEHSVRTMIEVSPNGYMQP--- 1138

  Fly  1225 DEVRKKAASTYLVEGSDMPPPRYQKDGTLPVIYPNNVVNACTLPHPRHNNGSAAIHMTRDDQMLI 1289
                             :.|..|:..|.|...|.       |..:...:.|:.::          
 Worm  1139 -----------------IEPMLYESTGLLEYDYQ-------TRSYMGSSQGTRSM---------- 1169

  Fly  1290 SKGVYIPSPSPAPPPDGSYYNMNSDRYLSYPPMEYPAALDFTAQPMPMAHLQPMTVTSLATNGGP 1354
               .|...|.|.||....:.|.||.:..|            .....|..||......::....||
 Worm  1170 ---TYANVPYPEPPQPSYHSNWNSLQRQS------------NNNTSPQHHLSTFINPNMGVRAGP 1219

  Fly  1355  1354
             Worm  1220  1219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 28/108 (26%)
Ig 76..155 CDD:299845 21/90 (23%)
IG_like 186..279 CDD:214653 28/93 (30%)
Ig 197..279 CDD:299845 23/82 (28%)
IG_like 296..376 CDD:214653 28/81 (35%)
Ig 300..361 CDD:299845 22/62 (35%)
Ig 380..454 CDD:299845 21/73 (29%)
IG_like 490..573 CDD:214653 28/96 (29%)
Ig 501..560 CDD:299845 20/72 (28%)
Ig 584..666 CDD:299845 24/95 (25%)
IG_like 585..666 CDD:214653 24/94 (26%)
I-set 678..767 CDD:254352 31/91 (34%)
IGc2 692..757 CDD:197706 25/67 (37%)
Ig 788..849 CDD:143165 13/60 (22%)
Ig 885..960 CDD:143165 24/75 (32%)
FN3 967..1051 CDD:238020 30/85 (35%)
syg-2NP_001309674.1 IG_like 25..105 CDD:214653 19/80 (24%)
Ig 33..122 CDD:299845 25/95 (26%)
Ig 147..228 CDD:299845 24/84 (29%)
IGc2 248..313 CDD:197706 22/64 (34%)
Ig 450..537 CDD:299845 25/92 (27%)
Ig 559..632 CDD:299845 22/76 (29%)
I-set 657..738 CDD:254352 29/84 (35%)
Ig 665..738 CDD:299845 26/76 (34%)
IG_like 748..828 CDD:214653 17/83 (20%)
IGc2 756..817 CDD:197706 14/64 (22%)
Ig 845..922 CDD:299845 25/77 (32%)
FN3 934..1023 CDD:238020 30/91 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I7498
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 438 1.000 Inparanoid score I938
Isobase 1 0.950 - 0 Normalized mean entropy S6746
OMA 1 1.010 - - QHG28764
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 1 1.000 - - FOG0005450
OrthoInspector 1 1.000 - - otm14539
orthoMCL 1 0.900 - - OOG6_107508
Panther 1 1.100 - - O PTHR11640
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4392
SonicParanoid 1 1.000 - - X3304
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.820

Return to query results.
Submit another query.