DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and Lrig1

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_032403.2 Gene:Lrig1 / 16206 MGIID:107935 Length:1091 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
Lrig1NP_032403.2 leucine-rich repeat 53..71 CDD:275380
LRR_RI 57..325 CDD:238064
LRR 1 71..92
leucine-rich repeat 72..95 CDD:275380
LRR_8 73..129 CDD:290566
LRR 2 95..116
LRR 3 118..139
LRR_8 142..225 CDD:290566
LRR 4 142..163
leucine-rich repeat 143..166 CDD:275380
LRR 5 166..187
leucine-rich repeat 167..190 CDD:275380
leucine-rich repeat 191..214 CDD:275380
LRR 6 191..212
LRR_8 213..273 CDD:290566
LRR 7 214..235
leucine-rich repeat 215..238 CDD:275380
LRR_RI 238..>423 CDD:238064
LRR 8 238..259
leucine-rich repeat 239..262 CDD:275380
LRR_8 261..321 CDD:290566
LRR 9 262..283
leucine-rich repeat 263..286 CDD:275380
LRR 10 286..307
leucine-rich repeat 287..310 CDD:275380
LRR_8 310..369 CDD:290566
LRR 11 310..331
leucine-rich repeat 311..334 CDD:275380
LRR 12 334..355
leucine-rich repeat 335..358 CDD:275380
LRR 13 358..380
leucine-rich repeat 359..383 CDD:275380
LRR_8 385..441 CDD:290566
LRR 14 385..406
leucine-rich repeat 386..409 CDD:275380
LRR 15 409..430
leucine-rich repeat 410..433 CDD:275380
LRRCT 444..492 CDD:214507
Ig_3 496..583 CDD:290638
I-set 497..597 CDD:254352
I-set 601..691 CDD:254352
Ig_1 618..692 CDD:143240
I-set 695..782 CDD:254352
IGc2 709..772 CDD:197706
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..990
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1059..1091
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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