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Protein Alignment sns and Il1r2

DIOPT Version :9

Sequence 1:	NP_001036532.1	Gene:	sns / 44097	FlyBaseID:	FBgn0024189	Length:	1542	Species:	Drosophila melanogaster
Sequence 2:	NP_001347729.1	Gene:	Il1r2 / 16178	MGIID:	96546	Length:	428	Species:	Mus musculus

Alignment Length:	386	Identity:	88/386 - (22%)
Similarity:	144/386 - (37%)	Gaps:	93/386 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   453 LVVICHGLNMQLTENVVSTHTINVLYPP---APPLISG--------YMEGQIIPAGSVQKLLC-- 504
            |:|:..|::...|..||  ||..|...|   ..|.:.|        ..:.::...|....|.|
Mouse    22 LLVLVTGVSAFTTPTVV--HTGKVSESPITSEKPTVHGDNCQFRGREFKSELRLEGEPVVLRCPL 84

  Fly   505 -----VSSGGNPLATLTWYKNDKRINSVIRAADKS---VSAEIT-ILANVSDNQAQYRCEASNS- 559
                 :||..:  :.|||.|.|   :|.:...|:.   |...|. ||..|..:...|.|...|:
Mouse    85 APHSDISSSSH--SFLTWSKLD---SSQLIPRDEPRMWVKGNILWILPAVQQDSGTYICTFRNAS 144

  Fly   560 -----ATEIPLFQSTTLSVHFAPETVKIRIEPEELRPGMEAT--IIC----DSSSSNPPAKLSWW 613
                 :.|:.:|::|..|:   |....::|.      .:..|  ::|    :..|||...|:.|:
Mouse   145 HCEQMSVELKVFKNTEASL---PHVSYLQIS------ALSTTGLLVCPDLKEFISSNADGKIQWY 200

  Fly   614 KDGIPIEGINNTSKPGLWGGTVSTL-----------EFRVNVTQEMNGQVYTCQSANEALQRSAH 667
            |..|.::..|   |..|..|..:.|           .:|..:|...|||.|.. :.|..|:....
Mouse   201 KGAILLDKGN---KEFLSAGDPTRLLISNTSMDDAGYYRCVMTFTYNGQEYNI-TRNIELRVKGT 261

  Fly   668 EAVSLDVLYRPKFVPP---------PSSTAVGVEGESLQVSLQTRANPTPVTYKWTKDGTTIPQD 723
            ....:.|:..|....|         |....:|. |.|....:...||.|.::..:.:...|   :
Mouse   262 TTEPIPVIISPLETIPASLGSRLIVPCKVFLGT-GTSSNTIVWWLANSTFISAAYPRGRVT---E 322

  Fly   724 GDHRIFADGG------SLNFTRLHRDDAGI-YSCSASNSQGGATLNITVVVEYGTTIKSVS 777
            |.|..:::..      ||.|..:.|:|... :.|.|||.:...:|:        ||:|.||
Mouse   323 GLHHQYSENDENYVEVSLIFDPVTREDLHTDFKCVASNPRSSQSLH--------TTVKEVS 375

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.