DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and AgaP_AGAP001126

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_322033.4 Gene:AgaP_AGAP001126 / 1282038 VectorBaseID:AGAP001126 Length:276 Species:Anopheles gambiae


Alignment Length:219 Identity:50/219 - (22%)
Similarity:85/219 - (38%) Gaps:38/219 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 TTPHDLQVLEGAEAMMRCEVANVAG-AVQWTKDG----FALGFSAVIPGFPRYSVLGDRK-QGIY 134
            |.|.::..|.|...::.|:|.|:.. .|.|.:..    ..:|         ||:...|:: :.::
Mosquito    37 TVPSNITGLVGKTVLLNCKVKNLGNRTVSWVRHRDIHLLTVG---------RYTYTSDQRFEAMH 92

  Fly   135 N-------LRISNASINDDADYQCQVGPARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRE 192
            :       |||..|...|...|:||:.   ....|.....||::.|..  ||.|   ...:.:.:
Mosquito    93 SPHTEEWTLRIRYAQRKDSGIYECQIS---TTPPIGHFVYLTIVEPVT--EING---GPDLFINK 149

  Fly   193 NQDLQLKCIVANA-KPAAQIVWYRGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEY 256
            ...:.|.|||..| :|...:||.....:...:.....:...|.|...|||.|.::.....|...|
Mosquito   150 GSTINLTCIVKYAPEPPPAVVWKHNRDDINFDSPRGGISLVTEKGILTTSRLLVQKAIASDSGLY 214

  Fly   257 TCQARHKALSPDMPMRATVQLSVL 280
            ||:       |.....|:|::.:|
Mosquito   215 TCE-------PSNANPASVRVHIL 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 23/106 (22%)
Ig 76..155 CDD:299845 21/91 (23%)
IG_like 186..279 CDD:214653 21/93 (23%)
Ig 197..279 CDD:299845 21/82 (26%)
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
AgaP_AGAP001126XP_322033.4 V-set 37..133 CDD:284989 24/107 (22%)
IG_like 39..121 CDD:214653 20/93 (22%)
IGc2 150..222 CDD:197706 19/78 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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