DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and AgaP_AGAP001201

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_321956.5 Gene:AgaP_AGAP001201 / 1281967 VectorBaseID:AGAP001201 Length:322 Species:Anopheles gambiae


Alignment Length:251 Identity:63/251 - (25%)
Similarity:103/251 - (41%) Gaps:42/251 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 AMMRCEVANVAG-AVQW--TKDGFALGFSA-VIPGFPRYSVLGDRKQGIYNLRISNASINDDADY 149
            |:::|.|.:... .|.|  .:|...|..:. ...|..|:||:.......::|:|..|...|...|
Mosquito    21 AVLKCRVKHKGDRTVSWMRKRDLHILTSNIYTYTGDQRFSVIHPPDSDDWDLKIEYAQQKDSGIY 85

  Fly   150 QCQVG-PARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQLKCIVANAKPAAQIVW 213
            :|||. ..::|.|:..:. ...:|..|..:|.|   :.:|.|::...:.|.|:| |.. |:.|.|
Mosquito    86 ECQVNTEPKINL
AVYLDV-TDFLSTAARAKIIG---SQEVHVKKGSTISLSCVV-NVH-ASSISW 144

  Fly   214 Y-------------RGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQARHKAL 265
            |             ||.:..:.||.|.          .|:|.|.|......|...|||       
Mosquito   145 YVYHGSSIVDFDSARGGISLETEKTEG----------GTSSRLMLTRATLRDSGNYTC------- 192

  Fly   266 SPDMPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNPPAQLIWY 321
            .|...:.|:||:.||....|..:: .|:|......||:.|:..|......::||::
Mosquito   193 VPTGAISASVQVHV
LNGEHPAAMQ-TSSGVPCPTHQTLILLFVSLNSCNVSKLIFF 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 21/85 (25%)
Ig 76..155 CDD:299845 19/70 (27%)
IG_like 186..279 CDD:214653 27/105 (26%)
Ig 197..279 CDD:299845 25/94 (27%)
IG_like 296..376 CDD:214653 6/26 (23%)
Ig 300..361 CDD:299845 6/22 (27%)
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
AgaP_AGAP001201XP_321956.5 Ig 9..97 CDD:299845 19/75 (25%)
IG_like 10..92 CDD:214653 19/70 (27%)
IG_like 118..206 CDD:214653 27/106 (25%)
IGc2 126..199 CDD:197706 22/91 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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