DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and AgaP_AGAP001239

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_321915.5 Gene:AgaP_AGAP001239 / 1281931 VectorBaseID:AGAP001239 Length:299 Species:Anopheles gambiae


Alignment Length:291 Identity:71/291 - (24%)
Similarity:117/291 - (40%) Gaps:41/291 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LRLLAVIVLASAPVPSHAQQ---QKF--RTTPHDLQVLEGAEAMMRCEVANVAG-AVQWTKDG-- 108
            :.|..|:.:.|..|.|:.:|   |.:  .:|..::....|..|::.|.|.|:.. ||.|.:..  
Mosquito     7 ITLFPVLNIISGEVQSYWEQPFAQPYFDNSTKREVTATVGQSALLHCRVRNLGDRAVSWIRKRDL 71

  Fly   109 --FALGFSAVIPGFPRYSVLGDRKQGIYNLRISNASINDDADYQCQVG-PARLNSAIRANAKLTV 170
              ..:|. .......|:..|.......:.|||::....|...|:|||. ..:::.|.|.|   .|
Mosquito    72 HILTVGI-LTYTNDQRFQSLHTEGSDEWTLRITSPQPRDSGTYECQVSTEPKISQAFRLN---VV 132

  Fly   171 ISPPASIEIKGYSHNSKVEVRENQDLQLKCI-VANAKPAAQIVWYRGN--VEYKPEKREDTVEES 232
            :|   ..:|.|   ||::.::...|:.|.|: :.:..|.:.|.||:|.  |.|........:.| 
Mosquito   133 VS---KAKILG---NSELFIKSGSDINLTCVALQSPAPPSFIYWYKGGRVVNYSQRGGISVLTE- 190

  Fly   233 TAKRFTTTSSLKLKPGPDDDYTEYTCQARHKALSPDMPMRATVQLSVLYPPGPPYIE--GYSAGE 295
               |.|.||.|.:......|...|||       ||.....|:|.:.|:....|..::  ..||..
Mosquito   191 ---RQTKTSKLVIARAMPSDSGNYTC-------SPSSSDSASVVVHVINGEQPAAMQHGNSSANS 245

  Fly   296 TLRRGQTVELMCRSRGGNPPAQLIWYKNGSQ 326
            .|...::..    .||..|..:.:.|..||:
Mosquito   246 VLINNRSFS----HRGHGPLDRWLAYLGGSK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 23/104 (22%)
Ig 76..155 CDD:299845 20/84 (24%)
IG_like 186..279 CDD:214653 25/95 (26%)
Ig 197..279 CDD:299845 23/84 (27%)
IG_like 296..376 CDD:214653 7/31 (23%)
Ig 300..361 CDD:299845 6/27 (22%)
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
AgaP_AGAP001239XP_321915.5 V-set 37..132 CDD:284989 23/98 (23%)
IG_like 39..131 CDD:214653 22/95 (23%)
IG_like 147..>213 CDD:214653 18/69 (26%)
Ig 152..>213 CDD:143165 17/64 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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