DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sns and AgaP_AGAP001658

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_321435.4 Gene:AgaP_AGAP001658 / 1281513 VectorBaseID:AGAP001658 Length:333 Species:Anopheles gambiae


Alignment Length:310 Identity:71/310 - (22%)
Similarity:116/310 - (37%) Gaps:58/310 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1139 PNLVIIG-ISLAAFGFLLVNASL--VAWFFVHQRRKKVAETTNQPAKTATIEMYAPSSYNDTVTG 1200
            |..||:| .:..:..|.|..|:|  |.|:|..:...:.....:.||:|..:............|.
Mosquito    45 PEAVIMGNAATLSCQFELEKATLYSVRWYFEGEEFYRFVPKESPPARTFPVSGITVDGTQSDATS 109

  Fly  1201 ETLSSVS-EKSESYSNEGSSQ-PEYIDEVRKKAASTYLVEGSDMP--PPRYQKDGTLPVIYPNNV 1261
            .||..|: :.:..:..|.|.. |.:..::|:  |...:||   :|  .|..|.|.| .:...:|.
Mosquito   110 VTLRGVTRDLTGQFQCEVSEDAPLFHTDIRQ--ARMQVVE---LPKEDPMMQLDKT-HITTLDNF 168

  Fly  1262 VNACTL--PHPRHN----NGSAAIHMTRDDQMLISKGVYIPSPSPAPPPDGSYYNMNSDRYLSYP 1320
            ...||:  ..|..|    ..:..||  |.....|:...|..:|:.:......:..:..|.|.|.|
Mosquito   169 RAVCTVGTSFPAANITWYINTKRIH--RSPYQRITYRSYEGTPTFSSLEMLPHSQVLQDIYQSMP 231

  Fly  1321 PMEYPAALDFTAQPMPMAHL------QPMTVTSLATNGGPTLIG----------NGSV--AAVAG 1367
            |  :..:|....: :.:.|:      |.:.|:.|.|...|.|:|          ||..  :.:.|
Mosquito   232 P--FHTSLTVMCE-ISILHIYTKSAQQRILVSDLVTTISPNLLGLDGSNNRRKNNGDPDNSPLTG 293

  Fly  1368 GSGTLRRGILRGVVGVPQPDVTHHTSTVGGSPMQMLHDLHPVNLSASTLT 1417
            |.|...|          ||....:...||.:.|      |.:|.:|..||
Mosquito   294 GGGLAGR----------QPRSLLYVLAVGAALM------HCLNGAALLLT 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
AgaP_AGAP001658XP_321435.4 Ig 167..244 CDD:299845 17/81 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.