DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sns and AgaP_AGAP008655

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_314755.4 Gene:AgaP_AGAP008655 / 1275506 VectorBaseID:AGAP008655 Length:408 Species:Anopheles gambiae


Alignment Length:455 Identity:97/455 - (21%)
Similarity:173/455 - (38%) Gaps:86/455 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   535 VSAEITILA---NVSDNQAQ---YRCEASNSATEIPLFQSTTLSVHFAPETVKIRIEPEELRPGM 593
            :||:...||   |::..|.:   :.|..:|    :..:::.|.|.|..|:...|:.:.:.:    
Mosquito    12 LSAQPEFLAPLDNLTVTQGRDVSFTCVVNN----LGQYRTLTTSTHVYPQVAWIKSDSKAI---- 68

  Fly   594 EATIICDSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMNGQVYTCQSA 658
             ..|.....:.||  :||...:|      :||     |       :..::..|..:...|.||..
Mosquito    69 -LAIHTHMVALNP--RLSVTHNG------HNT-----W-------KLHISHVQLNDSGSYMCQVN 112

  Fly   659 NEALQRSAHEAVSLDVLYRPKFVPPPSSTAVGVEGESLQVSLQTRANPTPVTYKWTKDGTTIPQD 723
            .:.::   |:..:|:............|..:..:.:.|::....:.||...:.:        |..
Mosquito   113 TDPMR---HQVSALNESEGKTSTASSLSAGLVCKIQCLKMCTHKKNNPHHQSPR--------PNS 166

  Fly   724 GDHRIFADGGSLNFTRLHRDDAGIYSCSA------SNSQGG-----ATLNITVVVEYGTTI---K 774
            |..           ..:.|:::.:..|.|      |:...|     ||......|.|..:.   .
Mosquito   167 GQR-----------FNVSRNESVLGCCFAFLSAFPSHQPNGPAQHEATRTPVYAVPYALSCINEP 220

  Fly   775 SVSENIVVNPGEDAMLSCTVEGKPLTEEHVKWERV-GYDMTVKTS------TTFANGTSYLHIKD 832
            :..|..|.|.|.:..|.|...|.|  |..|:|.|. |.|:.|:|.      ..|..| ..|.:..
Mosquito   221 NTLEGGVANEGGNVQLVCQATGVP--EPAVQWRRENGKDIVVRTEGREKQVVKFVEG-ERLVLNQ 282

  Fly   833 AKREDVGNFRCVADNRVDNPTNRDILLIVKFAPEIAKTPTLLRAASGTGERGRLPCRAQGSPKPQ 897
            .:|.|:|.:.|:|.|.|....::...:.|.|.|.:.....|:  |:.......|.|..:..|.|.
Mosquito   283 VQRTDMGGYLCIASNGVPPSVSKRFDVQVNFPPNVKAGNQLV--AAPVESHVLLQCIVEAFPTPL 345

  Fly   898 FIWRQDKKD-LPINRTYKYEVEERKIDSLTYESTLIVDKVAPADYGAYECVARNELGEAVETVRL 961
            ..|.  |.| :.:....||.:.|.|:::.|::..|.|..:...|:|.|.|.:.|.||::...:||
Mosquito   346 NGWH--KHDGMKLYEGEKYTISEEKLNAYTWQLNLTVKNLHKGDFGPYICSSINALGKSDARIRL 408

  Fly   962  961
            Mosquito   409  408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653 9/43 (21%)
Ig 501..560 CDD:299845 8/30 (27%)
Ig 584..666 CDD:299845 13/81 (16%)
IG_like 585..666 CDD:214653 13/80 (16%)
I-set 678..767 CDD:254352 13/99 (13%)
IGc2 692..757 CDD:197706 9/70 (13%)
Ig 788..849 CDD:143165 21/67 (31%)
Ig 885..960 CDD:143165 21/75 (28%)
FN3 967..1051 CDD:238020
AgaP_AGAP008655XP_314755.4 I-set 16..134 CDD:254352 26/149 (17%)
Ig 25..111 CDD:299845 20/114 (18%)
IG_like 227..311 CDD:214653 25/86 (29%)
IGc2 230..299 CDD:197706 22/71 (31%)
Ig 314..408 CDD:299845 24/97 (25%)
IG_like 332..408 CDD:214653 21/77 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.