DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and AgaP_AGAP004230

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_313139.4 Gene:AgaP_AGAP004230 / 1274072 VectorBaseID:AGAP004230 Length:897 Species:Anopheles gambiae


Alignment Length:1164 Identity:236/1164 - (20%)
Similarity:396/1164 - (34%) Gaps:349/1164 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 GQTVELMCR---SRGGNPPAQLIWYK--NGSQIRMAYRTSGRL--SENIYTFTAEAGDNKARFRC 357
            |:|:.|.|.   ...|:....::||:  .||.|..| .|.||.  |...::..:..|| :|.|:.
Mosquito    16 GETIYLPCNVSTHEPGDNVVLVLWYREDKGSPIYSA-DTRGREVGSAKRWSDDSMFGD-RAYFQF 78

  Fly   358 EASNVMSQNPLKAEVELSVLFAPTHVTVMGPTEARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVR 422
            |          |...||:|  .....|..|....||..||                     .|.|
Mosquito    79 E----------KEPGELAV--QNVRETDSGMYRCRVDFIV---------------------AQTR 110

  Fly   423 NATSKTIVSPEGGWTTTSNITAVVEPNKRSLVVICHGLNMQLTENVVSTHTINVLYPPAPPLISG 487
            |              :..|:|.:|.|.:   :||...|.|:.|                  .::|
Mosquito   111 N--------------SVVNLTIIVPPER---MVIRDQLGMERT------------------TVAG 140

  Fly   488 -YMEGQIIPAGSVQKLLCVSSGGNPLATLTWYKNDKRINSVIRAAD-------KSVSAEITI--L 542
             |.||..|      ||.|...||.|..|:|||:     :.|...||       |.:.:||.:  |
Mosquito   141 PYSEGDNI------KLRCDVYGGRPTPTVTWYR-----DGVAMVADTKYMPLGKHLRSEIALGPL 194

  Fly   543 ANVSDNQAQYRCEASNSATEIPLFQSTTLSVHFAPETVKIRIEPEELRPGMEATIICDSSSSNPP 607
            .. .|...:..|.|||.|...|:.||..:.::|||..:::....:.|..|....::|.|:.|.|.
Mosquito   195 TR-QDLHTKLVCRASNHARANPVEQSVQIDMNFAPLNIRLIGAHQPLSAGRRYDLLCQSAGSRPA 258

  Fly   608 AKLSWWKDGIPIE-GINNTSKPGLWGGTVSTLEFRVNVTQEMNGQVYTCQSANEALQRSA-HEAV 670
            |.::|:.||:.:: ....||..|  ..|.|||...:|.|..  |:..:|::.|..:|..| .:..
Mosquito   259 ASITWFLDGVRLDKSKETTSADG--NQTTSTLSIVLNRTDA--GKYLSCKAYNTYVQSDALEDGW 319

  Fly   671 SLDVLYRPKFVPPPSSTAVGV--------EGESLQVSLQTRANPTPVTYKWTKDGTTIPQDGDHR 727
            .||:.|     .|.:|..:|.        ||..:......:|:|.....:|..:..|:.::....
Mosquito   320 QLDIQY-----VPDASVRLGSSLDPDAIREGTDVYFDCIVKAHPAVYKVEWKHNNKTLTRNISQG 379

  Fly   728 IFADGGSLNFTRLHRDDAGIYSCSASNSQG-GATLNITVVVEYGTTIKSVSENIV-VNPGEDAML 790
            :.....||....:.|..||.|:|...|::| |::....:.|.|..|.......:. |...|:|.:
Mosquito   380 VIVSKHSLVLQGVSRTTAGNYTCVGFNAEGEGSSPTFELNVMYAPTCAPNQPRVYGVAKQENAEI 444

  Fly   791 SCTVEGKPLTEEHVKWERVGYDMTVKTSTTFANGTSYLHIKDAKREDVGNFRCVADNRVDNPTNR 855
            .|.|:..| .:...||             ||.|....:.::.:....:|...             
Mosquito   445 RCVVDANP-PDVEFKW-------------TFNNSAESIDVQASHISRLGTSS------------- 482

  Fly   856 DILLIVKFAPEIAKTPTLLRAASGTGERGRLPCRAQGSPKPQFIWRQDKKDLPINRTYKYEVEER 920
                ||.:.|.|                                                     
Mosquito   483 ----IVSYTPMI----------------------------------------------------- 490

  Fly   921 KIDSLTYESTLIVDKVAPADYGAYECVARNELGEAVETVRLEI--TSQPDPPLSLNILNVTHDTV 983
                             ..|||...|.|.|::|:..:.....|  ..:||...:..:.||:..::
Mosquito   491 -----------------ELDYGTLLCSATNKIGKQRQPCVFHIIAAGRPDQVHNCTVANVSMTSL 538

  Fly   984 TLAWTPGFDGGLKASYRVRYRMADREQYKYIDGLPNSHKLTIGGLRMNTLYLFSVMSWNELGQSS 1048
            .:....||:|||..|:.:..|.:..::.::.:..| ..:.|:..|..:.:|..:|.::|..|:|.
Mosquito   539 AVRCYEGFNGGLAQSFFLELRDSHSQEMRFNNTSP-VPRFTVPNLHPSAVYQLAVYAFNSKGRSE 602

  Fly  1049 YLPDLARAETKEAPPP--------SHPASSLGGGPPTTSQTPLGGTSGMLLVGVGAGIVVVLLNV 1105
              |.:..|.|:..|..        ..|.|.|   |.|.:.:...|.:..:|:| ...||:.|   
Mosquito   603 --PYVMSAATQRLPEKQMKDSEKVERPRSPL---PLTPTLSIAIGLAAAVLIG-SCAIVLAL--- 658

  Fly  1106 FVIGCCLHKRNEKRLKRGLELM-----PAELT---------EDSSNTPNLVIIGISLAAFGFLLV 1156
             ...|....|..|...:|..:.     |::.:         |.....|:::...|.         
Mosquito   659 -KFPCGASGRRNKETAQGTTVRTSSPGPSDKSVASKEYDGNESDEKNPDVIPDTID--------- 713

  Fly  1157 NASLVAWFFVHQRRKKVAETTNQPAK---TATIEMYAPSSYNDTVTGETLSSVSEKSES----YS 1214
              |.....::.:|:......||.|::   |.|    ||   |.|..|.::::....:.|    |.
Mosquito   714 --SDDQMEYIKRRQHISTIDTNSPSRLLLTTT----AP---NQTFIGSSMAAALHANHSSTLGYC 769

  Fly  1215 NEGSSQPEYIDEVRKKAASTYLVEGSDMPPPRYQKDGTLPVIYPNNVVNACTLP-HPRHNNGSAA 1278
            ...:..|:..:.:...:..                  .:|..:.......|||| ||        
Mosquito   770 TLRNGTPQASNSITNVSMC------------------HMPSTFTTASHTTCTLPRHP-------- 808

  Fly  1279 IHMTRDDQMLISKGVYIPSPSPAPPPDGSYYNMNSDRYLSYPPMEYPAALDFTAQPMPMAHLQPM 1343
                      ::.|.....|.|..|        |:..:.||..              .:|.::.:
Mosquito   809 ----------VTAGTGAVGPGPLTP--------NAHHWPSYGG--------------TIAGVRNI 841

  Fly  1344 TVTSLATNGGPTLIGNGSVAAVAGGSGTLRRGILRGVVGVPQPDVTHHTSTVGGSPMQM 1402
            |..|:.:|.|.......|..|:.....|.|   .|..:|:|:.:|:..|      |:.|
Mosquito   842 TAISVTSNQGSPAPPPPSAIAMQHLGPTAR---TRVCIGLPEDEVSADT------PLMM 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653 23/82 (28%)
Ig 300..361 CDD:299845 20/67 (30%)
Ig 380..454 CDD:299845 13/73 (18%)
IG_like 490..573 CDD:214653 29/91 (32%)
Ig 501..560 CDD:299845 22/67 (33%)
Ig 584..666 CDD:299845 23/82 (28%)
IG_like 585..666 CDD:214653 23/81 (28%)
I-set 678..767 CDD:254352 19/97 (20%)
IGc2 692..757 CDD:197706 14/64 (22%)
Ig 788..849 CDD:143165 10/60 (17%)
Ig 885..960 CDD:143165 7/74 (9%)
FN3 967..1051 CDD:238020 19/83 (23%)
AgaP_AGAP004230XP_313139.4 Ig 11..118 CDD:299845 34/150 (23%)
IG_like 11..102 CDD:214653 26/99 (26%)
Ig 150..224 CDD:299845 25/79 (32%)
Ig 246..307 CDD:299845 19/64 (30%)
IG_like 248..311 CDD:214653 20/66 (30%)
I-set 337..420 CDD:254352 16/82 (20%)
IGc2 344..409 CDD:197706 14/64 (22%)
Ig_3 440..503 CDD:290638 20/163 (12%)
FN3 522..601 CDD:214495 18/79 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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