DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sns and HPX4

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_308561.4 Gene:HPX4 / 1269907 VectorBaseID:AGAP007237 Length:1514 Species:Anopheles gambiae


Alignment Length:914 Identity:198/914 - (21%)
Similarity:339/914 - (37%) Gaps:203/914 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 LISGYMEG---QIIPAGSVQKLLCVSSGGNPLATLTWYKNDKRINSVIRAADKSVSAEITILANV 545
            |.|.|:.|   :.||.||.::|..:..                    :|..|.::..:.::|..|
Mosquito   140 LHSIYLHGNQIKTIPEGSFERLPSLRR--------------------LRLDDNALECDCSLLWFV 184

  Fly   546 SDNQAQYR--------CEASNSATEIPLFQSTTLSVHFA-PETVKIRIEPE--ELRPGMEATIIC 599
            ...|...|        |....:....|:...|....|.| ||.|   ::|.  |:..|..|...|
Mosquito   185 RTMQQPNRKSLVAGATCATPPALEGQPISSITEEDFHCAKPEIV---VQPRDIEISYGQTAVFSC 246

  Fly   600 DSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVSTL---EFRVNVTQEMNGQVYTC---QSA 658
             .:|.:|..::.|.::|.||...::        |.::.|   ..|::.....:...|.|   .|.
Mosquito   247 -KASGDPRPEIVWLQEGSPIRSESD--------GRITLLPDGSLRIDEIVPADAGQYACIARNSL 302

  Fly   659 NEALQRSAHEAVSLDVL----YRPKFVPPPSSTAVGVEGESLQVSLQTRANPTP-VTYKWTKDGT 718
            .|:..|:|..||:.:|:    ..|||:..|:.....:|||.:.:.......||| :.:|:..:..
Mosquito   303 GESRSRTASLAVNNEVVESEAEAPKFLRTPADPLELLEGEPIVLDCVVTGAPTPSILWKFNNENI 367

  Fly   719 TIPQDGDHRIFADGGSLNFTRLHRDDAGIYSCSASNSQGGATLNITVVVEYGTTIKSVSENIVVN 783
               |:|..::|.: |||.......||.|||:|.|.|:.|..::|:||:|.....|....||..|.
Mosquito   368 ---QNGRIKLFGN-GSLILPTSTLDDGGIYTCCAGNALGNISVNVTVLVNAPPRIVLGPENQNVK 428

  Fly   784 PGEDAMLSCTVEGKPLTEEHVKWERVGYDMTVKTSTTFANGTSYLHIKDAKREDVGNFRCVADNR 848
            .|....|.|..:|.||  .|:.|::.|..:...:...|.:....|.|..|:..|.|.:.|||:|.
Mosquito   429 VGSTLTLECEADGNPL--PHIWWKKDGLPVNETSQVYFTDDAIELTIDHAEESDSGTYVCVAENE 491

  Fly   849 VD-NPTNRDILLIVKFAPEIAKTPTLLRAASGTGERGRLPCRAQGSPKPQFIWRQDKKDLPINRT 912
            :. .....::::|....|.....|..|.|..||  ...:||:|:.....|..|:::.:.:.....
Mosquito   492 LGIAEVEAEVVVINVGPPRFLFEPYDLDAIEGT--TVEMPCKAENDDILQIKWQKEGRTITPKDK 554

  Fly   913 YKYEVEERKIDSLTYESTLIVDKVAPADYGAYECVARNELGEAVETVRLEITSQPDPPLSLNILN 977
            |:          ::...:|.:..:...|.|.|||...|:.|.|..:..|.:..:.:         
Mosquito   555 YR----------ISSAGSLFIANITLTDEGRYECSLLNKYGRATASGMLTVKKKAE--------- 600

  Fly   978 VTHDTVTLAWTPGFDGGLKASYRVRYRMADREQYKYIDGLPNSHKLTIGGL----RMNTLY---L 1035
                            .|.....||..:|  |..:.:|...|.   |||.:    |..|.|   |
Mosquito   601 ----------------ALPGDQYVRIAIA--EASREVDMAINQ---TIGRMFSTGRNTTRYHDDL 644

  Fly  1036 FSVMSW-----NELGQSSYLPDLARAETKEAPPPSHPASSLGGGPPTTSQT-----PLGGTSGML 1090
            |.::.:     .|:.:::.:.:.|....::     |..|   |...||:.|     .|.....:.
Mosquito   645 FRIVRFPTGPAREIARAAEVYERALVIIRK-----HVES---GANLTTNTTDFWYQDLLSPEYLD 701

  Fly  1091 LVGVGAGIVVVLLNVFVIGCCLHKR---------NEKRLKRG------LELMPAELTEDSSNTPN 1140
            |:...:|.:...:.......|.|.:         |.|....|      ..|:| .:.|:..|:| 
Mosquito   702 LLEQLSGCMAHRVTPNCSDLCFHSKYRSLDGTCNNYKHPAWGSSLTGFQRLLP-PVYENGFNSP- 764

  Fly  1141 LVIIGISLAAF--GFLLVNASLVAWFFVHQRRKKVAETTNQPAKTATIEMYAPSSYNDTVTGETL 1203
               ||.:.:|.  |:...:|.||:       ...::.:|..|....|..:.....:.|......:
Mosquito   765 ---IGWNRSAVYNGYRKPSARLVS-------TSLISTSTITPDDRITHMVMQWGQFLDHDLDHAI 819

  Fly  1204 SSVSEKSESYSNEGSSQP-EYIDEVRKKAASTYLVEGSDMPP--PRYQKDGTLPVIYPNNVVNA- 1264
            .||:  |||:......:. ||       ||..|.:   |:||  ||.|....:..:..:.|..: 
Mosquito   820 PSVT--SESWDGVDCKKTCEY-------AAPCYPI---DIPPGDPRIQNRRCIDFVRSSAVCGSG 872

  Fly  1265 -------CTLPHPRHNNGSAAIHMTR----------------DDQMLISKGVYIPSPSP----AP 1302
                   ...|..:.|..:|.|..::                .:|.|:..|.:.|...|    :.
Mosquito   873 MTSIFFGSVQPREQINQLTAFIDASQVYGYTETFAQELRNLTTEQGLLRDGPHFPQQKPLLPFSA 937

  Fly  1303 PPDG 1306
            |.||
Mosquito   938 PTDG 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653 15/93 (16%)
Ig 501..560 CDD:299845 8/66 (12%)
Ig 584..666 CDD:299845 19/89 (21%)
IG_like 585..666 CDD:214653 19/88 (22%)
I-set 678..767 CDD:254352 29/89 (33%)
IGc2 692..757 CDD:197706 21/65 (32%)
Ig 788..849 CDD:143165 18/60 (30%)
Ig 885..960 CDD:143165 15/74 (20%)
FN3 967..1051 CDD:238020 16/95 (17%)
HPX4XP_308561.4 leucine-rich repeat 49..67 CDD:275380
leucine-rich repeat 68..91 CDD:275378
LRR_4 90..129 CDD:289563
LRR_8 91..150 CDD:290566 4/9 (44%)
leucine-rich repeat 92..115 CDD:275378
LRR_4 114..155 CDD:289563 5/14 (36%)
leucine-rich repeat 116..139 CDD:275378
LRRCT 172..>210 CDD:214507 5/37 (14%)
Ig 225..314 CDD:299845 23/100 (23%)
I-set 225..314 CDD:254352 23/100 (23%)
I-set 326..412 CDD:254352 29/89 (33%)
IGc2 340..402 CDD:197706 21/65 (32%)
I-set 416..503 CDD:254352 23/88 (26%)
IGc2 430..493 CDD:197706 19/64 (30%)
I-set 509..595 CDD:254352 22/97 (23%)
Ig 526..594 CDD:299845 15/77 (19%)
An_peroxidase 727..1266 CDD:281139 48/239 (20%)
peroxidasin_like 848..1287 CDD:188658 18/94 (19%)
VWC 1438..1496 CDD:278520
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.