DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and LRIG3

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:NP_700356.2 Gene:LRIG3 / 121227 HGNCID:30991 Length:1119 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352
Ig 76..155 CDD:299845
IG_like 186..279 CDD:214653
Ig 197..279 CDD:299845
IG_like 296..376 CDD:214653
Ig 300..361 CDD:299845
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
LRIG3NP_700356.2 LRR 20..395 CDD:227223
leucine-rich repeat 58..74 CDD:275378
LRR_RI <65..>245 CDD:238064
LRR 1 75..96
leucine-rich repeat 78..99 CDD:275378
LRR 2 99..120
leucine-rich repeat 100..115 CDD:275378
LRR 3 122..142
leucine-rich repeat 123..146 CDD:275378
LRR 4 146..167
leucine-rich repeat 147..168 CDD:275380
LRR 5 168..189
leucine-rich repeat 169..192 CDD:275380
LRR 6 193..214
leucine-rich repeat 194..216 CDD:275380
LRR 7 216..237
leucine-rich repeat 217..240 CDD:275380
LRR 8 240..261
leucine-rich repeat 241..264 CDD:275380
LRR_RI 262..>446 CDD:238064
LRR 9 264..285
leucine-rich repeat 265..288 CDD:275380
LRR 10 288..309
leucine-rich repeat 289..312 CDD:275380
LRR 11 312..333
leucine-rich repeat 313..336 CDD:275380
LRR 12 336..357
leucine-rich repeat 337..360 CDD:275380
LRR 13 360..382
leucine-rich repeat 361..385 CDD:275380
LRR_8 387..442 CDD:290566
LRR 14 387..408
leucine-rich repeat 388..411 CDD:275380
LRR 15 411..432
leucine-rich repeat 412..435 CDD:275380
LRRCT 446..494 CDD:214507
Ig_3 498..585 CDD:290638
I-set 499..599 CDD:254352
I-set 603..693 CDD:254352
Ig_1 620..694 CDD:143240
I-set 697..784 CDD:254352
IGc2 711..774 CDD:197706
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1073..1093
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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