DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and LOC101735075

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_031747070.1 Gene:LOC101735075 / 101735075 -ID:- Length:312 Species:Xenopus tropicalis


Alignment Length:288 Identity:64/288 - (22%)
Similarity:102/288 - (35%) Gaps:81/288 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 MRCEVANVAGAVQ---WTKDGFALGFSAVIPGFPRYSVLGDRKQGIYNLRISNASINDDADYQCQ 152
            :.|.|...|...|   |.:|      :..|.|..|..::|            .|...|..:||||
 Frog    30 LTCTVGPTAPLSQRYSWYRD------NETINGEERSFIIG------------KAEEKDSGNYQCQ 76

  Fly   153 VG------PARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQLKCIVANAKPAAQI 211
            .|      |.|||.   .|.::.:.:||:              |.|...|.|:|.....| |..:
 Frog    77 AGTSERSDPVRLNV
---TNDRVILQAPPS--------------VYEGDPLTLRCYNPYTK-AQNV 123

  Fly   212 VWYRGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTC---QARHK-ALSPDMPMR 272
            .:|:.||         |:..|.....|...|:.:.       ..|||   ..||. ..||.....
 Frog   124 TFYKDNV---------TISSSLTDTLTLVGSMAMN-------GTYTCIKYLQRHAIRYSPYTSAE 172

  Fly   273 ATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCR-----SRGGNPPAQLIWYKNGSQIRMAYR 332
            ..:.:..|:|  .|.|.  :|.::::.|..:.|.|.     :||.. ..|..:|:||..::    
 Frog   173 IVITI
QELFP--RPEIR--AANDSVQEGDVLTLSCHTALNPARGAT-QLQFAFYRNGHNVQ---- 228

  Fly   333 TSGRLSENIYTFTAEAGDNKARFRCEAS 360
              |..|.:.||..:....:...:.|:.:
 Frog   229 --GFSSSSNYTIQSARPQDSGNYTCDTA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 22/87 (25%)
Ig 76..155 CDD:299845 17/72 (24%)
IG_like 186..279 CDD:214653 21/96 (22%)
Ig 197..279 CDD:299845 18/85 (21%)
IG_like 296..376 CDD:214653 14/70 (20%)
Ig 300..361 CDD:299845 14/66 (21%)
Ig 380..454 CDD:299845
IG_like 490..573 CDD:214653
Ig 501..560 CDD:299845
Ig 584..666 CDD:299845
IG_like 585..666 CDD:214653
I-set 678..767 CDD:254352
IGc2 692..757 CDD:197706
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
LOC101735075XP_031747070.1 Ig 11..90 CDD:416386 20/77 (26%)
Ig strand A 12..15 CDD:409353
Ig strand A' 20..23 CDD:409353
Ig strand B 27..33 CDD:409353 0/2 (0%)
Ig strand C 44..49 CDD:409353 1/4 (25%)
Ig strand C' 51..53 CDD:409353 0/1 (0%)
Ig strand E 58..63 CDD:409353 1/4 (25%)
Ig strand F 71..76 CDD:409353 2/4 (50%)
Ig strand G 84..90 CDD:409353 3/5 (60%)
Ig 96..177 CDD:416386 23/111 (21%)
Ig strand B 108..115 CDD:409353 3/6 (50%)
Ig strand C 121..127 CDD:409353 0/5 (0%)
Ig strand C' 130..135 CDD:409353 2/13 (15%)
Ig strand E 139..142 CDD:409353 0/2 (0%)
Ig strand F 151..161 CDD:409353 3/9 (33%)
Ig strand G 167..177 CDD:409353 1/9 (11%)
Ig 187..>251 CDD:416386 14/72 (19%)
Ig strand A' 192..194 CDD:409353 0/1 (0%)
Ig strand B 198..205 CDD:409353 2/6 (33%)
Ig strand C 217..222 CDD:409353 1/4 (25%)
Ig strand C' 225..230 CDD:409353 0/10 (0%)
Ig strand E 234..238 CDD:409353 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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