DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and nphs1

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_031761552.1 Gene:nphs1 / 100494620 XenbaseID:XB-GENE-487811 Length:1236 Species:Xenopus tropicalis


Alignment Length:1249 Identity:386/1249 - (30%)
Similarity:602/1249 - (48%) Gaps:98/1249 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 AQQQKFRTTPHDLQVLEGAEAMMRCEVANVAGAVQWTKDGFALGFSAVIPGFPRYSVLGDRKQGI 133
            |:||.||..|.::.|::|:.|::.|||.:..|.|||.|:|..||....||||.|||:.||..:|.
 Frog    21 AKQQVFRVQPDNITVVQGSTALLSCEVEHGTGMVQWEKNGLLLGPDRNIPGFLRYSMTGDPHKGE 85

  Fly   134 YNLRISNASINDDADYQCQVGPARLN-SAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQ 197
            |||||..:.::|||:|.||||.:.:: ..|...|.:.|:.||.:...:.|:..|:|......:..
 Frog    86 YNLRIERSELDDDAEYHCQVGRSEVSLGIISRTALINVLIPPKAPTFEEYAAGSRVTWVYGVEYT 150

  Fly   198 LKCIVANAKPAAQIVWYRGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQARH 262
            :.|...:|||||.:...:..:|...:...:  ..|..|...|....|:.|...|:....||.|.:
 Frog   151 VTCQATDAKPAAALTIKKSGLEVSGDSSSN--PGSRDKLENTAMVAKVIPQSSDNGKLLTCLALN 213

  Fly   263 KALSPDMPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNPPAQLIWYKNGSQI 327
            .||  ..|:..:..::||:||..|.|||| .|.:::.|:|::|:|.|..|||.|.|.|.||...:
 Frog   214 PAL--QTPITVSFTMNVLFPPNAPIIEGY-IGPSVKAGETLKLICISLSGNPLATLQWSKNDDVV 275

  Fly   328 RMAYRTSG--RLSENIYTFTAEAGDNKARFRCEASNVMSQNPLKAEVELSVLFAPTHVTVMGPTE 390
            ...:.|..  |.|.:..|...:..||.|...|||.|.::...||..:.|:|:|.||.||::|.:.
 Frog   276 STRWETDEVVRASRSHLTLNIKPADNMAVVSCEAVNHVTPETLKTSIILNVVFLPTEVTILGSSS 340

  Fly   391 ARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVRNATSKTIVSPEGGWTTTSNITAVVEPNKRSLVV 455
            ......:..:|.||.||||.:|:|.:|.:::.|.......:..||..|.||:|......:..:.:
 Frog   341 GPEKSNLTFSCFTAASNPPVQIRWWLGPKELVNTIVTISDAVHGGKVTMSNLTMEALREEHGMAL 405

  Fly   456 ICHGLNMQLTENVVSTHTINVLYPP------APPLISGYMEGQIIPAGSVQKLLCVSSGGNPLAT 514
            .|...|..:.....::.|::|.|||      |||      ..:...||:..|:.|.||||||...
 Frog   406 TCEAFNEAILYTKSNSVTLSVQYPPQNVWIEAPP------ADKFFRAGTSVKMTCFSSGGNPPPR 464

  Fly   515 LTWYKNDKRIN--SVIRAADKSVSAEITILANVSDNQAQYRCEASNSATEIPLFQSTTLSVHFAP 577
            |||.|:.|.::  |.|.:. |.|:.||||:...|||.|.|||.|||......|..||.|.|.|..
 Frog   465 LTWIKDTKSLSGGSQIHSG-KIVTKEITIITVPSDNMATYRCNASNIGKTPALTASTKLKVQFPA 528

  Fly   578 ETVKIRIEPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVSTLEFRV 642
            ..|.|....:|.|.|....:.|.:.||||.:.:||.|||..::..:...||.|:||..|:....:
 Frog   529 IDVNIISSAKEYRRGSTIILTCVTGSSNPASTISWVKDGEQLKAQDLGRKPSLYGGISSSSRVTL 593

  Fly   643 NVTQEMNGQVYTCQSANEALQRSAHEAVSLDVLYRPKFVPPPSSTAVGVEGESLQVSLQTRANPT 707
            ....:.||:..:|::.:..|..:.:....|::|:.|:|:....:....||..:..:.::.||||.
 Frog   594 KAASKDNGRRVSCEAFSSVLNEAVNTFYKLNILFPPEFLDDQPAVVQAVEHGAALIPVRVRANPP 658

  Fly   708 PVTYKWTKDGTTIPQDGDHRIFADG-GSLNFTRLHRDDAGIYSCSASNSQGGATLNITVVVEYGT 771
            .:.|.|:..|..:.:||.:|....| |:|....:.|.|:|:|:.:..|.:|..::.|.:.|:|..
 Frog   659 QINYTWSLWGEKLIRDGAYRHHLRGEGALEIWNVSRADSGVYNVTCVNKEGKNSIVIRLDVQYSP 723

  Fly   772 TIKSVSENIVVNPGEDAMLSCTVEGKPLTEEHVKWERVG-YDMTVKTSTTFANGT-SYLHIKDAK 834
            ||:|:.:. .|:.|.||.::||.:..|.|:...:|..:| .:..:.......:|. ..|.|::||
 Frog   724 TIRSLGDT-EVDLGSDAEIACTADANPATDSMFQWRWLGDEERDLSALERKVDGVIGRLVIREAK 787

  Fly   835 REDVGNFRCVADNRVDNPTNRDILLIVKFAPEIAKTPTLLR-AASGTGER-GRLPCRAQGSPKPQ 897
            |.|.|.:.|..||.:......|..|||:|.|:|.|...|.: |..|.|:. ..|.|:|:|.|...
 Frog   788 RTDAGRYECTVDNGIPPSIKADARLIVRFKPDIHKGVHLSKVAVPGDGKSVAALVCKAEGIPSVA 852

  Fly   898 FIWRQDKKDLPINRTYKYEVEERKIDSLT-YESTLIVDKV-APADYGAYECVARNELGEAVETVR 960
            |.|.::...|.: :..:|  .|:....|: :.|||::..| |..||..:.|.|.|.||....|::
 Frog   853 FSWAKNGVSLDL-KDPRY--SEKTFHELSVHTSTLVISNVSAVKDYALFTCTATNTLGVDSFTIQ 914

  Fly   961 LEITSQPDPPLSLNILNVTHDTVTLAWTPGFDGGLKASYRVRYRMADREQYKYIDGLPNSHKL-T 1024
            |..||:||||..|.::..||::|||.|:.|||||.:..:|||||....:.:.|:|..|....: |
 Frog   915 LVSTSRPDPPSGLRVIGFTHNSVTLQWSAGFDGGAEQKFRVRYRWPGTDSHMYVDVFPPQETVFT 979

  Fly  1025 IGGLRMNTLYLFSVMSWNELGQSSY-----LPDLARAETKEAPPPSH-----PASSLGGGPPTTS 1079
            |.||:.:|.|.|||.:.|.||:|.|     :..:...||...|.|:.     |.:.....||   
 Frog   980 ITGLKGSTAYNFSVNAINALGESDYADQGAVVSVTTKETTLLPVPTQQPTRAPTAEALEWPP--- 1041

  Fly  1080 QTPLGGTSGMLLVGVGAGIVVVLL-NVFVIGCCLHKRNEKRLKRGLELMPAELTEDSSNTPNLVI 1143
                     .:|..|.||..::|: |...|| ||.||:..:.:.|     ..:.:|.|....|..
 Frog  1042 ---------YILAAVCAGGALLLVSNAAFIG-CLVKRSRDKSQGG-----EGVKKDESQQRALNE 1091

  Fly  1144 IG----ISLAAFGFLLVNA---------------SLVAWFFVHQRRKKVAETTNQPAK-TATIEM 1188
            .|    |:..|...||:::               |.:.::.|...|..::.....|.: .:.|..
 Frog  1092 YGDGELINTHAKKTLLIDSGSETGSSLYQDSASESGIYYYPVRDYRPSLSPQYEVPERGESGIRG 1156

  Fly  1189 YAPSSYND---TVTGETLSSVSEKSES---------YSNEG--SSQPEYIDEVRKKAASTYLVEG 1239
            :....|.|   |..|.....|.:..:|         .:|:|  :|..||.|..|.:......|..
 Frog  1157 WEEGGYEDWYSTSEGHEYEEVGDYPQSSRVRWQNRETANQGREASWAEYQDPGRLRIYDEADVTL 1221

  Fly  1240 SDMPPPRYQKDGTL 1253
            ||:....|...|.|
 Frog  1222 SDVYETPYGGRGQL 1235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 42/97 (43%)
Ig 76..155 CDD:299845 37/78 (47%)
IG_like 186..279 CDD:214653 21/92 (23%)
Ig 197..279 CDD:299845 19/81 (23%)
IG_like 296..376 CDD:214653 27/81 (33%)
Ig 300..361 CDD:299845 23/62 (37%)
Ig 380..454 CDD:299845 22/73 (30%)
IG_like 490..573 CDD:214653 37/84 (44%)
Ig 501..560 CDD:299845 31/60 (52%)
Ig 584..666 CDD:299845 23/81 (28%)
IG_like 585..666 CDD:214653 23/80 (29%)
I-set 678..767 CDD:254352 24/89 (27%)
IGc2 692..757 CDD:197706 19/65 (29%)
Ig 788..849 CDD:143165 18/62 (29%)
Ig 885..960 CDD:143165 24/76 (32%)
FN3 967..1051 CDD:238020 38/89 (43%)
nphs1XP_031761552.1 Ig 25..105 CDD:416386 37/79 (47%)
Ig strand A 25..28 CDD:409353 1/2 (50%)
Ig strand A' 32..35 CDD:409353 0/2 (0%)
Ig strand B 41..51 CDD:409353 4/9 (44%)
Ig strand C 53..58 CDD:409353 3/4 (75%)
Ig strand C' 60..62 CDD:409353 1/1 (100%)
Ig strand D 82..86 CDD:409353 1/3 (33%)
Ig strand F 99..108 CDD:409353 6/8 (75%)
Ig strand G 113..123 CDD:409353 2/9 (22%)
Ig 138..228 CDD:416386 21/93 (23%)
Ig strand A' 139..143 CDD:409353 2/3 (67%)
Ig strand B 150..157 CDD:409353 1/6 (17%)
Ig strand C 162..167 CDD:409353 1/4 (25%)
Ig strand C' 170..172 CDD:409353 0/1 (0%)
Ig strand D 175..182 CDD:409353 0/8 (0%)
Ig strand E 188..196 CDD:409353 1/7 (14%)
Ig strand F 205..213 CDD:409353 3/7 (43%)
Ig strand G 219..225 CDD:409353 1/5 (20%)
Ig 229..326 CDD:416386 36/97 (37%)
Ig strand A 229..232 CDD:409353 1/2 (50%)
Ig strand A' 235..239 CDD:409353 2/3 (67%)
Ig strand B 249..259 CDD:409353 4/9 (44%)
Ig strand C 262..271 CDD:409353 4/8 (50%)
Ig strand D 273..280 CDD:409353 0/6 (0%)
Ig strand E 285..295 CDD:409353 3/9 (33%)
Ig strand F 303..312 CDD:409353 4/8 (50%)
Ig strand G 318..325 CDD:409353 2/6 (33%)
Ig 332..413 CDD:416386 22/80 (28%)
Ig strand A' 333..337 CDD:409353 2/3 (67%)
Ig strand B 345..355 CDD:409353 2/9 (22%)
Ig strand C 358..367 CDD:409353 4/8 (50%)
Ig strand C' 368..371 CDD:409353 0/2 (0%)
Ig strand D 374..381 CDD:409353 0/6 (0%)
Ig strand E 386..395 CDD:409353 4/8 (50%)
Ig strand F 403..411 CDD:409353 1/7 (14%)
Ig_3 429..509 CDD:404760 36/86 (42%)
Ig strand B 449..458 CDD:409353 3/8 (38%)
Ig strand C 464..469 CDD:409353 3/4 (75%)
Ig strand C' 472..474 CDD:409353 1/1 (100%)
Ig strand D 483..486 CDD:409353 1/3 (33%)
Ig strand F 502..509 CDD:409353 4/6 (67%)
Ig strand G 514..524 CDD:409353 4/9 (44%)
Ig 541..618 CDD:416386 22/76 (29%)
Ig strand B 544..554 CDD:409353 1/9 (11%)
Ig strand C 557..566 CDD:409353 3/8 (38%)
Ig strand C' 567..570 CDD:409353 1/2 (50%)
Ig strand D 572..579 CDD:409353 0/6 (0%)
Ig strand E 584..594 CDD:409353 2/9 (22%)
Ig strand F 602..614 CDD:409353 1/11 (9%)
Ig <652..719 CDD:416386 20/66 (30%)
Ig strand C 659..667 CDD:409353 2/7 (29%)
Ig strand C' 668..671 CDD:409353 1/2 (50%)
Ig strand D 677..683 CDD:409353 1/5 (20%)
Ig strand E 686..694 CDD:409353 1/7 (14%)
Ig strand F 698..706 CDD:409353 2/7 (29%)
Ig strand G 708..719 CDD:409353 2/10 (20%)
Ig_3 723..800 CDD:404760 22/77 (29%)
Ig strand B 739..743 CDD:409353 1/3 (33%)
Ig strand C 752..758 CDD:409353 0/5 (0%)
Ig strand E 779..783 CDD:409353 1/3 (33%)
Ig strand F 793..798 CDD:409353 1/4 (25%)
Ig strand G 807..810 CDD:409353 0/2 (0%)
Ig 814..922 CDD:416386 36/110 (33%)
putative Ig strand A 819..824 CDD:409353 2/4 (50%)
putative Ig strand B 839..846 CDD:409353 2/6 (33%)
putative Ig strand C 850..856 CDD:409353 1/5 (20%)
putative Ig strand C' 859..861 CDD:409353 0/1 (0%)
putative Ig strand D 868..871 CDD:409353 1/4 (25%)
putative Ig strand E 878..886 CDD:409353 3/7 (43%)
putative Ig strand F 897..904 CDD:409353 2/6 (33%)
putative Ig strand G 919..922 CDD:409353 1/2 (50%)
FN3 921..1015 CDD:238020 38/93 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H20974
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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