DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and kirrel1b

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_017212964.1 Gene:kirrel1b / 100170816 ZFINID:ZDB-GENE-070912-173 Length:801 Species:Danio rerio


Alignment Length:771 Identity:187/771 - (24%)
Similarity:290/771 - (37%) Gaps:172/771 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WIKHLQLLRLLAVIVLASAPVPSHAQQQKFRTTPHDLQVLEGAEAMMRCEVANVAGAVQWTKDGF 109
            ||..|.::.:..|.   |.|        :|...|.|..|:.|...::.|.|.|..|.|||||||.
Zfish     9 WIVTLAIISVHRVF---SGP--------RFSQEPADQSVVIGERVVLSCVVFNYTGIVQWTKDGL 62

  Fly   110 ALGFSAVIPGFPRYSVLGDRKQGIYNLRISNASINDDADYQCQVGPARLNSAIRANAKLTVISPP 174
            |||....:..:|||.||.....|.|||.|::|.:.||:.|:||...|.|.|   ..|||||:.||
Zfish    63 ALGIGEDLRAWPRYRVLRIMDVGQYNLEITSADLTDDSLYECQATEAALRS---RRAKLTVLIPP 124

  Fly   175 ASIEIKGYSHNSKVEVRENQDLQLKCIVANAKPAAQIVWYRGNVEYKPEKREDTVEESTAKRFTT 239
            ....|:|   :.::.:.......|.|:...|||.:.|.||:..:..: .....|...|..||.||
Zfish   125 DGPVIEG---SPEILLTAGTSFNLTCVSRGAKPMSTIEWYKDGIIVE-GAHTSTEVLSDRKRVTT 185

  Fly   240 TSSLKLKPGPDDDYTEYTCQARHKALSPDMPMRATVQLSVLYPPGPPY-IEGYSAGETLRRGQTV 303
            .|.|:::|...|....:||.|.:  |:..:..|:||.|::.:||.... ||..|..|    |:.|
Zfish   186 KSFLEIQPMDTDTGRNFTCVASN--LAAPLGKRSTVTLNIHHPPTVILSIEPRSVLE----GERV 244

  Fly   304 ELMCRSRGGNPPAQLIWYKNGSQIRMAYRTSGRLSENIYTFTAEAGDNKARFRCEASNVMSQNPL 368
            :..|::....|.....|.|.|..:..|       .|:::..||:.........|...|.:...  
Zfish   245 KFTCQATANPPIMGYRWAKGGVILDGA-------RESVFETTADHSFFTEPVSCLVFNAVGST-- 300

  Fly   369 KAEVELSVLFAPTHVTVMGPTEARVGDIVPLTCTTAPSNPPAEIKWMVGG-------------RQ 420
            ...:.:.|.|.|..|....|....|...|.|.|..: .|||..:.|...|             :.
Zfish   301 NVSILVDVHFGPILVVEPRPVTVDVDSDVTLNCKWS-GNPPLTLTWTKKGSSMVLSNSNQLFLKS 364

  Fly   421 VRNATS-----KTIVSPEGGWTTTSNITAVVEP--NKRSLVVICHGLNMQLTENVVSTHTINVLY 478
            |..|.:     |.||...|...|...:|....|  :...:.....|...::...:.||       
Zfish   365 VSQADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSEPIQYAVRGEKGEIKCYIAST------- 422

  Fly   479 PPAPPLISGYME-------GQIIPAGSVQKLLCVSSGGNPLATLTWYKNDKRINSVIRAADKSVS 536
            ||...::..:.|       |.::...:|::....:.||..|:|||       ||:|:.|      
Zfish   423 PPPDKIVWAWKENVWEKERGTLLERYTVEQSRPATQGGAVLSTLT-------INNVMEA------ 474

  Fly   537 AEITILANVSDNQAQYRCEASNSATEIPLFQSTTLSVHFAPETVKIRIEPEELRPGMEATIICDS 601
                      |.|:.|.|.|.|:               |.|.|:.|.:|..::..          
Zfish   475 ----------DFQSTYNCTAWNA---------------FGPGTMIITLEETDIAS---------- 504

  Fly   602 SSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVST----------LEF---------RVNVTQE 647
                        :|.:|: |:       :.||:|.:          |.|         |..||.:
Zfish   505 ------------EDIVPV-GV-------IAGGSVGSSILLLLLLFALIFYLYRQRKSSRRGVTLK 549

  Fly   648 MNGQVYTCQSANEALQRSAHEAVS---LDVLYRPKFVPPPS---STAVGVEGESLQVSLQTRANP 706
            .:.:|.|........:.:|..:.:   :..:|  .|:|..|   ||....:...|:..|||....
Zfish   550 PDIKVETVNKETNLEEEAASASTATRMVKAMY--SFLPSVSLSPSTQPFKDDMDLKQDLQTETLE 612

  Fly   707 TPVTYKWTKDGTTIPQDGDHRIFA----DGGSLNFTRLHRDDAGIYSCSASNSQGG 758
            ..|.....||    |.:|.:.:.|    :..|...:.|:::.......|.|.|.||
Zfish   613 PKVEEYEAKD----PTNGYYNVRATTHDEVRSSTRSLLYQEFRAPNPASVSASTGG 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 41/96 (43%)
Ig 76..155 CDD:299845 34/78 (44%)
IG_like 186..279 CDD:214653 26/92 (28%)
Ig 197..279 CDD:299845 26/81 (32%)
IG_like 296..376 CDD:214653 13/79 (16%)
Ig 300..361 CDD:299845 12/60 (20%)
Ig 380..454 CDD:299845 21/93 (23%)
IG_like 490..573 CDD:214653 19/89 (21%)
Ig 501..560 CDD:299845 16/58 (28%)
Ig 584..666 CDD:299845 14/100 (14%)
IG_like 585..666 CDD:214653 14/99 (14%)
I-set 678..767 CDD:254352 22/88 (25%)
IGc2 692..757 CDD:197706 15/68 (22%)
Ig 788..849 CDD:143165
Ig 885..960 CDD:143165
FN3 967..1051 CDD:238020
kirrel1bXP_017212964.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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