DRSC/TRiP Functional Genomics Resources

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Protein Alignment sns and si:ch211-180a12.2

DIOPT Version :9

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_001920945.3 Gene:si:ch211-180a12.2 / 100150385 ZFINID:ZDB-GENE-121214-236 Length:903 Species:Danio rerio


Alignment Length:1114 Identity:215/1114 - (19%)
Similarity:367/1114 - (32%) Gaps:394/1114 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KHLQLLRLLAVIVLASAPVPSHAQQQKFRTTPHDLQVLEGAEAMMRCEVA------NVAGAVQWT 105
            |.|..|.||.:|...|:.               |:.|..|:..::.|..|      |....:.|:
Zfish     4 KVLSYLWLLGLIKAGSSV---------------DVSVSPGSSTVLNCSFALPALVDNSLLNITWS 53

  Fly   106 KDGFAL--------GF---SAVIPGFPRYSVLG--DRKQGIYNLRISNASINDDADYQCQVGPAR 157
            ..|..:        ||   |...|.|| .:|..  ..:||:|..|:|    .:|.||..:|    
Zfish    54 SGGSIIASKNHTQAGFFLNSTAFPSFP-LTVFNATPHQQGVYECRVS----YNDTDYATEV---- 109

  Fly   158 LNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQLKCIVAN-AKPAAQIVWYR-GNVEY 220
             ...|.|...:::|||.|.::.|     |.||          |...: :.|.....|.| ||...
Zfish   110 -TLTILAPPVVSIISPEAVLKRK-----SVVE----------CWARSFSPPQIMFTWTRGGNKIQ 158

  Fly   221 KPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQARHKAL--------SPDMPMRATVQL 277
            :|:|.:  |..:....:...|.|...|...:....:.|:.:|.||        :|.:.:...|.|
Zfish   159 EPQKLQ--VNRTEDGLYDAVSFLTFIPQISNQNISFGCEVQHSALVKPVLEEFTPHITVLPKVTL 221

  Fly   278 SVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNP-PAQLIWYKNG---SQIRMAYRT-SGRL 337
            ||:  |...:            ..:|.|.|...|..| ...::|..||   |::.::.:. .|..
Zfish   222 SVV--PSSSH------------SSSVTLSCDISGFYPNNISVLWIHNGKKLSELPLSIQNEDGTY 272

  Fly   338 SENIY-TFTAEAGDNKARFRCEASNVMSQNPLKAEVELSVLFAPTHVTVMGPTEARVGDIVPLTC 401
            ..:.| |.|.|........:|.|.....|.|....::||.:            :.||        
Zfish   273 RRHQYHTLTREERSRGGEVQCVALQPSGQEPANGTIDLSTV------------DLRV-------- 317

  Fly   402 TTAPSNPPAEIKWMVGGRQVRNATSKTIVSPEGGWTTTSNITAVVEPNKRSLVVICHGLNMQLTE 466
                .||..       .:..:.:.:..|:|          :|.|        .::|.|.:.:..:
Zfish   318 ----QNPGL-------NKSAKASVAMMIIS----------LTLV--------FLLCFGFSWKRRD 353

  Fly   467 NVVSTHTINVLYPPAPPLISG-------YMEGQIIPAGSVQKLLCVSSGGNPLATLTWYKNDKRI 524
            ..:.:..|:.:..| |.::.|       .:||::  |..||              .||:.||..|
Zfish   354 EKLKSLNISAIVLP-PRVVVGKKGRVTISVEGRL--AERVQ--------------TTWFLNDIPI 401

  Fly   525 NSVIRAADKSVSAEITILANVSDNQAQYRCEASNSATEIPLFQSTTLSVHFAPETVKIRIEPEEL 589
            .                  :.|..:.:|....|.|.|.             ...:|.:..|...|
Zfish   402 K------------------DTSHKEKKYGAFRSASYTS-------------RNSSVSVLSEKNPL 435

  Fly   590 RPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMNGQVYT 654
            .|          ||::...||   ...:|:...:|:||.     ..|::.|..::... .|.|:.
Zfish   436 LP----------SSASGYYKL---HTQMPLRSSSNSSKQ-----LFSSVTFIPSLAVH-KGSVFK 481

  Fly   655 CQSANEALQRSAHEAVSLDVLYRPKF--VPPPSSTAV-----GVEGESLQVSLQ-TRANPTPVTY 711
            ||.:.:...:...|.||      .||  :.||..:.:     ..||..:.::.. :..:|..:|:
Zfish   482 CQVSYKGKDKIVAERVS------EKFTILAPPEVSEIQFSEPNEEGGVVTMTAHASHFHPDIITF 540

  Fly   712 KWTKDGTTIPQDGDHRIFADGGSLNFTRL------HRDDA-GIYSC-------SASNSQGGATLN 762
            :|               |.:||.|:...:      .|.|| |.:|.       .|...:|...:.
Zfish   541 RW---------------FCEGGELSPVSIPQALAAPRPDAEGFFSAMSQCRLPKAELERGETRVW 590

  Fly   763 ITVVVEYGTTIKS----VSENIVVNPGEDAMLSCTV----EGKPLTEEHVKWERVGY---DMTVK 816
            :|:   :.|.:|.    .:...:..|....:|||.|    ||: ||   :..|..|:   :::||
Zfish   591 VTI---HHTALKQPITRQTRGFIKQPSISEILSCPVASVLEGR-LT---LACEITGFYPPEISVK 648

  Fly   817 TSTTFANGTSYLHIKDAKREDVGNFRCVADNRVDNPTNRDILLIVKFAPEIAKTPTLLRAASGTG 881
                      :||.|..:.|| |:     |:..:.....::...::..|...:...||:..:...
Zfish   649 ----------WLHSKGNEIED-GD-----DSEEEIKDGAEVWGPLQTLPRTFRAKALLKDVNEMT 697

  Fly   882 ERGRLPCRAQ--------------------------------------------GSPKPQFIWR- 901
            ..|::.||..                                            |.|..:.:|. 
Zfish   698 RGGQIICRVSHCCLLKPVDRVWRNTHTVAPSIPPSLSVHWSSDGVGIFSIVLCGGRPSAEVLWAA 762

  Fly   902 --------QDKKDLPINRTYKYEVEE---------RKIDSLTYESTLIVDKVAP--ADYGA-YEC 946
                    |.|:....|...|.|::.         || ||.:...| ...|:.|  .|:.. ||.
Zfish   763 GGSTLSRLQSKERERENNEGKLELKSVCALVRSTGRK-DSESRRGT-HARKIRPPSVDFNTDYEK 825

  Fly   947 VARNELGEAVETVRLEITSQPDP--------------PLSLN--------------ILNVTHDTV 983
            |  ||..:.:::|:.|  .||:|              |..:|              .:.:||..:
Zfish   826 V--NECVDGLKSVQEE--KQPEPNKHTKENDENEDMHPSHVNTVRLRKEKSERLRVTVEITHPAL 886

  Fly   984 TL----AWT 988
            .|    .||
Zfish   887 HLPAYRTWT 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 I-set 73..170 CDD:254352 26/115 (23%)
Ig 76..155 CDD:299845 24/97 (25%)
IG_like 186..279 CDD:214653 22/102 (22%)
Ig 197..279 CDD:299845 19/91 (21%)
IG_like 296..376 CDD:214653 19/85 (22%)
Ig 300..361 CDD:299845 16/66 (24%)
Ig 380..454 CDD:299845 8/73 (11%)
IG_like 490..573 CDD:214653 15/82 (18%)
Ig 501..560 CDD:299845 8/58 (14%)
Ig 584..666 CDD:299845 17/81 (21%)
IG_like 585..666 CDD:214653 17/80 (21%)
I-set 678..767 CDD:254352 21/110 (19%)
IGc2 692..757 CDD:197706 15/79 (19%)
Ig 788..849 CDD:143165 19/67 (28%)
Ig 885..960 CDD:143165 23/139 (17%)
FN3 967..1051 CDD:238020 9/54 (17%)
si:ch211-180a12.2XP_001920945.3 Ig 19..114 CDD:299845 25/119 (21%)
IG_like 22..113 CDD:214653 24/100 (24%)
C1-set 123..205 CDD:284964 23/98 (23%)
IgC 237..309 CDD:143166 16/71 (23%)
IgC 515..604 CDD:143166 19/106 (18%)
IgC 609..720 CDD:143166 26/130 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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