DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wit and TGFBR2

DIOPT Version :9

Sequence 1:NP_001261395.1 Gene:wit / 44096 FlyBaseID:FBgn0024179 Length:913 Species:Drosophila melanogaster
Sequence 2:NP_001020018.1 Gene:TGFBR2 / 7048 HGNCID:11773 Length:592 Species:Homo sapiens


Alignment Length:511 Identity:133/511 - (26%)
Similarity:230/511 - (45%) Gaps:91/511 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CPDGYTFCFTIWNQTANGARVVKQGCWKDNTDRTSIC---------------SQSECTSSAPTSK 118
            |......|..:|.:.            .:|....::|               :..:|........
Human   102 CEKPQEVCVAVWRKN------------DENITLETVCHDPKLPYHDFILEDAASPKCIMKEKKKP 154

  Fly   119 TSSLYYCCCSGGVCN------AQYSVVEP---------------APLELGSNEGRTSITNRATEK 162
            ..:.:.|.||...||      .:|:...|               .||.:..:   ..|.......
Human   155 GETFFMCSCSSDECNDNIIFSEEYNTSNPDLLLVIFQVTGISLLPPLGVAIS---VIIIFYCYRV 216

  Fly   163 QHQSFLASTMLGLAGGLTALTIGIFLAVQYCRTAKEKPEPEESPLAPSGPGYSSNLRNVDNMNLI 227
            ..|..|:||.      .|..|..:....::|....|....:.|....:...:::.|..::   |.
Human   217 NRQQKLSSTW------ETGKTRKLMEFSEHCAIILEDDRSDISSTCANNINHNTELLPIE---LD 272

  Fly   228 GMLGSGKYGTVMKGLLHD------QEVAVKIYPEEHHQYYVNERNIYALPLMECPALLSYFGYDE 286
            .::|.|::..|.|..|..      :.|||||:|.|.:..:..|::|::...::...:|.:...:|
Human   273 TLVGKGRFAEVYKAKLKQNTSEQFETVAVKIFPYEEYASWKTEKDIFSDINLKHENILQFLTAEE 337

  Fly   287 RCTMDGRMEYQLVLSLAPLGCLQDWLIANTLTFSECCGMLRSITRGISHLHTELRLGDQHKPC-- 349
            |.|..|: :|.|:.:....|.||::|..:.:::.:...:..|:.|||:|||::      |.||  
Human   338 RKTELGK-QYWLITAFHAKGNLQEYLTRHVISWEDLRKLGSSLARGIAHLHSD------HTPCGR 395

  Fly   350 ----VAHRDINTRNVLVQADLSCCIADFGFALKVFGSKYEYKGEVAMAETKSINEVGTLRYMAPE 410
                :.|||:.:.|:||:.||:||:.|||.:|::       ...:::.:..:..:|||.||||||
Human   396 PKMPIVHRDLKSSNILVKNDLTCCLCDFGLSLRL-------DPTLSVDDLANSGQVGTARYMAPE 453

  Fly   411 LLEGAVNLRDCETSLKQMDVYALGLVLWEVATRCSDFYAPGQATPPYKAPYEQEVGSHPSFDQMQ 475
            :||..:||.:.| |.||.|||::.|||||:.:||:   |.|: ...|:.|:..:|..||..:.|:
Human   454 VLESRMNLENVE-SFKQTDVYSMALVLWEMTSRCN---AVGE-VKDYEPPFGSKVREHPCVESMK 513

  Fly   476 ALVVRHKARPLFPTGWGGGAAAKVVRDTCEDCWDHDADARLTSLCAEERMQEMSTL 531
            ..|:|.:.||..|:.|......::|.:|..:|||||.:||||:.|..||..|:..|
Human   514 DNVLRDRGRPEIPSFWLNHQGIQMVCETLTECWDHDPEARLTAQCVAERFSELEHL 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
witNP_001261395.1 snake_toxin 57..133 CDD:264434 9/78 (12%)
STYKc 226..517 CDD:214568 100/302 (33%)
STKc_BMPR2_AMHR2 228..528 CDD:270956 104/311 (33%)
TGFBR2NP_001020018.1 ecTbetaR2 74..177 CDD:401023 11/86 (13%)
STKc_TGFbR2_like 273..567 CDD:270957 105/312 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG3653
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.