DRSC/TRiP Functional Genomics Resources

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Protein Alignment wit and babo

DIOPT Version :10

Sequence 1:NP_001261395.1 Gene:wit / 44096 FlyBaseID:FBgn0024179 Length:913 Species:Drosophila melanogaster
Sequence 2:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster


Alignment Length:588 Identity:151/588 - (25%)
Similarity:239/588 - (40%) Gaps:141/588 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DNSFHDDDG----------DQDSSGELQEQQVESTPI----PS--EP------HRRTC------- 69
            ||..||::.          |.|:||.:........||    ||  :|      |..||       
  Fly    77 DNRSHDNNNASAVSMLLPQDGDASGAVAPAVTPQLPIYIAQPSAKKPENKIKCHCDTCKESNNIC 141

  Fly    70 -PDGYTFCFTIWNQTANGARVVKQGCWKDN----TDRTSICSQSECTSSAPTSK---TSSLYYCC 126
             .||  ||||...:.::|:.:....|...:    ..|:..|:..  ....||::   .:..:.||
  Fly   142 ETDG--FCFTSVEKNSDGSIIFSYRCLHKSQIFPPGRSIWCNDG--LHGGPTARPVGRNGAHACC 202

  Fly   127 CSGGVCN------------------AQYSVVEPAPLELGSNEGRTSITNRATEKQHQSFLASTML 173
            .....||                  .|.||.:..|..|.|.|                       
  Fly   203 KDRDFCNRFLWPKTKDQRSDRVEEGRQISVQDYVPHRLTSWE----------------------- 244

  Fly   174 GLAGGLTALTIGIFLAV--------QYCRTAKEKPE-----PEESPLAP---------------- 209
                 ..|:.:|..|.:        .||:..|....     .|:|...|                
  Fly   245 -----FVAIILGATLFICFTGTSTWYYCQRRKRMASGRTFAKEDSAYDPILNGNTTIHDIIEMTT 304

  Fly   210 SGPGYSSNL-----RNV-DNMNLIGMLGSGKYGTVMKGLLHDQEVAVKIYPEEHHQYYVNERNIY 268
            ||.| |:.|     |:: ..:.|..::|.|::|.|.:|....:.|||||:.......:..|..||
  Fly   305 SGSG-SAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSREECSWFREAEIY 368

  Fly   269 ALPLMECPALLSYFGYDERCTMDGRMEYQ--LVLSLAPLGCLQDWLIANTLTFSECCGMLRSITR 331
            ...::....:|.:...|.:   |.....|  ||......|.|.|:|..:.:..:....|..||..
  Fly   369 QTVMLRHENILGFIAADNK---DNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSLSIAT 430

  Fly   332 GISHLHTELRLGDQHKPCVAHRDINTRNVLVQADLSCCIADFGFALKVFGSKYEYKGEVAMAETK 396
            |::|||.:: :|.:.||.:||||:.::|:||:::|||.|.|.|.|:     ::..|.:  ..:..
  Fly   431 GLAHLHMDI-VGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAV-----RHVEKND--SVDIP 487

  Fly   397 SINEVGTLRYMAPELLEGAVNLRDCETSLKQMDVYALGLVLWEVATRCSDFYAPGQATPPYKAPY 461
            |.:.|||.||||||:|:.::|.:..: |.|:.||||.||:|||:|.||:    .|.....|:.||
  Fly   488 STHRVGTKRYMAPEVLDESMNDQHFD-SYKRADVYAFGLILWEIARRCN----MGMIYDEYQLPY 547

  Fly   462 EQEVGSHPSFDQMQALVVRHKARPLFPTGWGGGAAAKVVRDTCEDCWDHDADARLTSLCAEERMQ 526
            ...|...||.::|:.:|...|.||..|..|........:....::||..:..||||:|..::.:.
  Fly   548 YDVVQPDPSIEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIKKTLA 612

  Fly   527 EMS 529
            .:|
  Fly   613 SIS 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
witNP_001261395.1 TFP_LU_ECD_Wit 25..138 CDD:467138 33/158 (21%)
STKc_BMPR2_AMHR2 228..528 CDD:270956 95/301 (32%)
baboNP_476999.1 TFP_LU_ECD_Babo 127..210 CDD:467127 18/86 (21%)
GS 294..324 CDD:197743 6/30 (20%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 95/302 (31%)

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