DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wit and Tgfbr2

DIOPT Version :9

Sequence 1:NP_001261395.1 Gene:wit / 44096 FlyBaseID:FBgn0024179 Length:913 Species:Drosophila melanogaster
Sequence 2:NP_033397.3 Gene:Tgfbr2 / 21813 MGIID:98729 Length:592 Species:Mus musculus


Alignment Length:586 Identity:155/586 - (26%)
Similarity:248/586 - (42%) Gaps:143/586 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NRQYSCMSYQEDDNSFHDDDGDQDSSGELQEQQVESTPIPSEPHRRTCPDGYTFCFTIWNQTANG 86
            :.|.||||                        ....|.|..:||.        .|..:|.:.   
Mouse    87 DNQKSCMS------------------------NCSITAICEKPHE--------VCVAVWRKN--- 116

  Fly    87 ARVVKQGCWKDNTDRTSIC---------------SQSECTSSAPTSKTSSLYYCCCSGGVCNAQY 136
                     ..|....::|               :..:|..........:.:.|.|:...|| .|
Mouse   117 ---------DKNITLETVCHDPKLTYHGFTLEDAASPKCVMKEKKRAGETFFMCACNMEECN-DY 171

  Fly   137 SVVEPAPLELGSNEGRTSITNRATEKQHQSFLASTMLGLAGGLTALTIGIFLAV---QYC----R 194
            .:.        |.|..||..:          |...::.:.|......:||.:||   .||    |
Mouse   172 IIF--------SEEYTTSSPD----------LLLVIIQVTGVSLLPPLGIAIAVIIIFYCYRVHR 218

  Fly   195 TAKEKPEPEESP--------------LAPSGPGYSSNLRNVDNMN-------LIGMLGSGKYGTV 238
            ..|..|..|.|.              |.......||...|..|.|       |..::|.|::..|
Mouse   219 QQKLSPSWESSKPRKLMDFSDNCAIILEDDRSDISSTCANNINHNTELLPIELDTLVGKGRFAEV 283

  Fly   239 MKGLLHD------QEVAVKIYPEEHHQYYVNERNIYALPLMECPALLSYFGYDERCTMDGRMEYQ 297
            .|..|..      :.|||||:|.|.:..:..|::|::...::...:|.:...:||.|..|: :|.
Mouse   284 YKAKLKQNTSEQFETVAVKIFPYEEYSSWKTEKDIFSDINLKHENILQFLTAEERKTELGK-QYW 347

  Fly   298 LVLSLAPLGCLQDWLIANTLTFSECCGMLRSITRGISHLHTELRLGDQHKPC------VAHRDIN 356
            |:.:....|.||::|..:.:::.:...:..|:.|||:|||::      |.||      :.|||:.
Mouse   348 LITAFHAKGNLQEYLTRHVISWEDLRKLGSSLARGIAHLHSD------HTPCGRPKMPIVHRDLK 406

  Fly   357 TRNVLVQADLSCCIADFGFALKVFGSKYEYKGEVAMAETKSINEVGTLRYMAPELLEGAVNLRDC 421
            :.|:||:.||:||:.|||.:|::       ...:::.:..:..:|||.||||||:||..:||.:.
Mouse   407 SSNILVKNDLTCCLCDFGLSLRL-------DPTLSVDDLANSGQVGTARYMAPEVLESRMNLENV 464

  Fly   422 ETSLKQMDVYALGLVLWEVATRCSDFYAPGQATPPYKAPYEQEVGSHPSFDQMQALVVRHKARPL 486
            | |.||.|||::.|||||:.:||:   |.|: ...|:.|:..:|..||..:.|:..|:|.:.||.
Mouse   465 E-SFKQTDVYSMALVLWEMTSRCN---AVGE-VKDYEPPFGSKVREHPCVESMKDSVLRDRGRPE 524

  Fly   487 FPTGWGGGAAAKVVRDTCEDCWDHDADARLTSLCAEERMQEM---STLRPRAQAQ---PSSPLLN 545
            .|:.|......::|.:|..:|||||.:||||:.|..||..|:   ..|..|:.:|   |....||
Mouse   525 IPSFWLNHQGIQIVCETLTECWDHDPEARLTAQCVAERFSELEHPERLSGRSCSQEKIPEDGSLN 589

  Fly   546 T 546
            |
Mouse   590 T 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
witNP_001261395.1 snake_toxin 57..133 CDD:264434 11/90 (12%)
STYKc 226..517 CDD:214568 100/302 (33%)
STKc_BMPR2_AMHR2 228..528 CDD:270956 104/311 (33%)
Tgfbr2NP_033397.3 ecTbetaR2 74..177 CDD:286061 20/142 (14%)
STYKc 269..566 CDD:214568 105/315 (33%)
STKc_TGFbR2_like 273..567 CDD:270957 105/312 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..592 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG3653
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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