DRSC/TRiP Functional Genomics Resources

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Protein Alignment wit and acvr1c

DIOPT Version :10

Sequence 1:NP_001261395.1 Gene:wit / 44096 FlyBaseID:FBgn0024179 Length:913 Species:Drosophila melanogaster
Sequence 2:XP_002933316.2 Gene:acvr1c / 100487548 XenbaseID:XB-GENE-487108 Length:537 Species:Xenopus tropicalis


Alignment Length:501 Identity:138/501 - (27%)
Similarity:214/501 - (42%) Gaps:92/501 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 CFTIWNQTANGARVVKQGCW--------KDNTDRTSIC-----SQSECTSSAPTSKTSSLYYCCC 127
            |..:..:..|.....:..||        |:...::.|.     :|..|.||...::|.     ||
 Frog    72 CVCLLCENTNYTCQTEGACWTSVMLTHGKEEVLKSCISLPEFKAQVFCHSSNNITRTE-----CC 131

  Fly   128 SGGVCN---AQYSVVEPAPLELGSNEGRTSITNRATEKQHQSFLASTMLGLAGGLTALTIGIFLA 189
            ....||   .:...|.|....:|..|....:|           ::..:|.:...:||..    ..
 Frog   132 LSDFCNNITLRLPAVTPGVSHMGHVELTVIVT-----------VSICLLSVVIMVTAYV----CQ 181

  Fly   190 VQYCRTAKEKPEPEESPL-------------------APSGPGYSSNL---RNVDNMNLI-GMLG 231
            .:||...|.:.:..|.||                   ..||.|....|   |.:....:| .::|
 Frog   182 ERYCAKNKARRQCVEEPLTECPLDIAGKSLKDLIYDMTTSGSGSGLPLLVQRTIARTVVIQELVG 246

  Fly   232 SGKYGTVMKGLLHDQEVAVKIYPEEHHQYYVNERNIYALPLMECPALLSYFGYDERCTMDGRMEY 296
            .|::|.|.:|....::|||||:.....:.:..|..||...::....:|.:...|.:   |.....
 Frog   247 KGRFGEVWRGKWCGEDVAVKIFSSRDERSWFREAEIYQTVMLRHENILGFIAADNK---DNGTWT 308

  Fly   297 Q--LVLSLAPLGCLQDWLIANTLTFSECCGMLRSITRGISHLHTELRLGDQHKPCVAHRDINTRN 359
            |  |:......|.|.|:|..||:|......:..|:..|::|||.|: :|.|.||.:||||:.::|
 Frog   309 QLWLISEFHEQGSLFDYLNCNTVTIGGMMKLALSVVSGLAHLHMEI-VGTQGKPAIAHRDLKSKN 372

  Fly   360 VLVQADLSCCIADFGFALKVFGSKYEYKGEVAMAETKSINE---VGTLRYMAPELLEGAVNLRDC 421
            :||:.:.:|||||.|.|:|          ..::..|..|.:   |||.||||||||:.::|....
 Frog   373 ILVKKNETCCIADLGLAVK----------HDSITNTIDIPQNPRVGTKRYMAPELLDDSINTYHF 427

  Fly   422 ETSLKQMDVYALGLVLWEVATRCSDFYAPGQATPPYKAPYEQEVGSHPSFDQMQALVVRHKARPL 486
            : |.|..|:|:||||.||:|.|||    .|.....|:.||...|.|.||.:.::.:|...|.||.
 Frog   428 D-SFKCSDIYSLGLVYWEIARRCS----VGGVVDEYQLPYYDMVPSDPSLEDVRKVVCEQKLRPS 487

  Fly   487 FPTGWGGGAAAKVVRDTCEDCWDHDADARLTS---------LCAEE 523
            .|..|....|.:::.....:||..:..||||:         ||.||
 Frog   488 IPNQWQSFEALRIMGRIMRECWYANGKARLTALRIKKTISQLCVEE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
witNP_001261395.1 TFP_LU_ECD_Wit 25..138 CDD:467138 15/77 (19%)
STKc_BMPR2_AMHR2 228..528 CDD:270956 103/310 (33%)
acvr1cXP_002933316.2 TFP_LU_ECD_ALK7 68..143 CDD:467070 15/75 (20%)
TGF_beta_GS 210..237 CDD:462503 5/26 (19%)
STKc_TGFbR1_ACVR1b_ACVR1c 243..530 CDD:271045 99/305 (32%)

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