DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wit and tgfbr2a

DIOPT Version :10

Sequence 1:NP_001261395.1 Gene:wit / 44096 FlyBaseID:FBgn0024179 Length:913 Species:Drosophila melanogaster
Sequence 2:XP_073787446.1 Gene:tgfbr2a / 100334928 ZFINID:ZDB-GENE-120404-1 Length:659 Species:Danio rerio


Alignment Length:564 Identity:157/564 - (27%)
Similarity:247/564 - (43%) Gaps:125/564 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GDQDSSGEL-----QEQQVESTPIPSEPH-RRTCPDGYTFCFTIWNQTANGARVVKQGC------ 94
            |||.:...|     :|:::..|...|... ::.|    .|| .:.:...|.:.|.:..|      
Zfish   120 GDQCNQNLLLRKLTEEEKLSKTNSSSGFRLKQNC----KFC-DVESSVCNASGVCESACGINSIC 179

  Fly    95 ----------WKDNTDRTSI---C--------------SQSECTSSAPTSKTSSLYYCCCSGGVC 132
                      |:.|...:||   |              |||.........:  .||.|.|:...|
Zfish   180 ETPDEVCASAWRSNGGNSSIETVCHNPALLFHGHNLTDSQSRVCQMRRVEE--DLYICSCNDEEC 242

  Fly   133 N---------AQYSVVE-PAPLELGSNEGRTSITNRATEKQHQSFLASTMLGLAGGLTALTIGI- 186
            |         .||..|: ..|.|                        |:...||..|.::.:.| 
Zfish   243 NDRLFFNHDLKQYPGVQFDPPSE------------------------SSWFSLAPVLISVFVLIP 283

  Fly   187 --FLAVQYC-RTAKEKPE-PEESPL---------APSGPGYSSNLRNVDNMN---------LIGM 229
              .|:|.|| ..::.|.: |.:..|         .|.....||:: |.:::|         |..:
Zfish   284 IVLLSVFYCYHISQHKLKLPNKKSLDSERCNIFMNPEEHSDSSSI-NANSLNHNTELLPIQLDRV 347

  Fly   230 LGSGKYGTVMKGLLHD-----QEVAVKIYPEEHHQYYVNERNIYALPLMECPALLSYFGYDERCT 289
            :|.|::..|.|..|..     |.|||||:|.|....:.:|..|::...:....:|.:...:||  
Zfish   348 VGKGRFADVYKAKLKQSADSFQTVAVKIFPYEEFSSWKSEWQIFSDVELRHENVLQFLTAEER-- 410

  Fly   290 MDGRMEYQLVLSLAPLGCLQDWLIANTLTFSECCGMLRSITRGISHLHTELRLGDQHKPCVAHRD 354
             ....:|.|:.:....|.||:.|....:.:.|.|.:..|:.||::|||::.....:.|..:||||
Zfish   411 -TAERQYWLITAYHERGNLQELLALQVIGWEEMCRLGVSLARGVAHLHSDRTPCGRAKVSIAHRD 474

  Fly   355 INTRNVLVQADLSCCIADFGFALKVFGSKYEYKGEVAMAETKSINEVGTLRYMAPELLEGAVNLR 419
            :.:.||||::|.|||:.|||.:|::...       ::..|..:..:|||.||||||:||..::|.
Zfish   475 LKSSNVLVKSDWSCCVCDFGLSLRLDSC-------LSPEELANSGQVGTARYMAPEVLESRMDLE 532

  Fly   420 DCETSLKQMDVYALGLVLWEVATRCSDFYAPGQATPPYKAPYEQEVGSHPSFDQMQALVVRHKAR 484
            :.| |.||.|||::.|||||:.:|||   |.|... .|:.|:.:..| ||..:.|:..|:|.:.|
Zfish   533 NTE-SFKQADVYSMALVLWEIMSRCS---ATGDVR-DYEPPFGKLKG-HPCVESMKDDVIRDRLR 591

  Fly   485 PLFPTGWGGGAAAKVVRDTCEDCWDHDADARLTSLCAEERMQEM 528
            |..||.|...|....:..|.|:|||||.:||||:.|..||..::
Zfish   592 PEIPTSWSKHAGVHHLSSTIEECWDHDPEARLTAQCVVERFDDI 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
witNP_001261395.1 TFP_LU_ECD_Wit 25..138 CDD:467138 29/143 (20%)
STKc_BMPR2_AMHR2 228..528 CDD:270956 107/304 (35%)
tgfbr2aXP_073787446.1 None

Return to query results.
Submit another query.