Protein Alignment fus and rbm12ba

DIOPT Version :9

• Sequence 1: NP_524691.1
• Gene: fus / 44095
• FlyBaseID: FBgn0023441
• Length: 967
• Species: Drosophila melanogaster
• Sequence 2: NP_001071207.1
• Gene: rbm12ba / 777631
• ZFINID: ZDB-GENE-061103-58
• Length: 523
• Species: Danio rerio
• Alignment Length: 598
• Identity: 115/598 - (19%)
• Similarity: 204/598 - (34%)
• Gaps: 180/598 - (30%)

  Fly    99 GNSLENGSE--------LILPIAEAQAAGKPLSEAIEEFDAYLRSLSLHDTEIKLVTDGQLPLRQ 155
            |.:.|.|||        |.:|.......|..:.||...|              |...:|||.:|
Zfish    10 GLNTEAGSEDIRRFFHGLHIPEGGVHIIGGEMGEAFIIF--------------KTEREGQLAMR- 59

  Fly   156 CLHREASAKDVELPAYYNRFSDLRKE----FLRYKSGDLARALVPVKDV---------------- 200
              :...:.|...:..:.:..::|:::    ..:.|..:|...:||....
Zfish    60 --YSGKTIKGSSVSLHISSVAELKRKMESRLKKPKPTELETNVVPSSPTDTNAALLLSLMGAIYG 122

  Fly   201 -----KKMLQAPTLPMPQSIAEMLGELNISSVEDNDFYIRESRDMVTVIQTLLQAGHKFAANEL- 259
                 |...|..|...|       |.:|.:|.|...:.: ..:.|.|..|..|  .|:.|:.|.
Zfish   123 LHSNNKDNQQGQTQQTP-------GNVNQNSPEMQTWPL-TGKQMNTDAQHSL--NHELASTEQQ 177

  Fly   260 ----VNLVL-EPGICSIDDEVDGNCIVRARGLPWQSSDQDIAKFFRGLNV----AKGGVAL---C 312
                .||.| :||            .:|..|.|...:.|:|.:|.|||.|    .|..:.|   |
Zfish   178 TGRGENLNLSKPG------------YLRLYGFPDCVAKQEIFQFLRGLPVLEVITKVRLQLGWCC 230

  Fly   313 LSPLGR-RNGEALIRFVCQEHRDMALKRHKHH--IGTRYIEVYRASGEDFLAIAGGASNEA---- 370
            |..|.. .:.|..:::..::.::..::....|  :.|..:|..:...::....:....|||
Zfish   231 LVKLASFSDAEEGLKYSHRKFKEFNVEVRLAHEKMWTDAVEESKNCTQNLKPHSSSEQNEANNNR 295

  Fly   371 ---QAFLSK---------GA-------------QVIIRMRGLPYDATAKQVLDFFTTGDTPPCHV 410
               :||.:|         |:             :..:.:..|..:.|..::.:.|      .||.
Zfish   296 NAVRAFTNKRIAEEQPSPGSPKKFCRNDPSPQKEYSVIVNNLSRNITKTEIKNIF------GCHA 354

  Fly   411 LDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
            :. |..:..:....|..|..||:.|.|..|...|:..:..::|.:.||:...|..|:..:|:::.
Zfish   355 IQ-NYRIKHLLNKWGERTSTAFITFDNSEDQASAMKMNGMNVGLKNIEVLSITKEEILDILSKNR 418

  Fly   476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLIT 540
            ..|::       :||                                         |....||
Zfish   419 FVKSW-------RPP-----------------------------------------PYGNTHL-- 433

  Fly   541 SGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLC 605
               :.:||..|..|.:...|.:..|...:  :|....|.::::.||...|||.::...:..|:.
Zfish   434 ---SMSCIYARNFPADVRKEEVKGFFMPY--NIGDDAVRLLVDNQGNGIGEAIVEFRFQNIAKQ- 492

  Fly   606 AQRRHNHYMMFGK 618
            |||.|..|.|..|
Zfish   493 AQRLHGKYFMGAK 505

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fus	NP_524691.1	DnaQ_like_exo	13..194	CDD:299142	20/106 (19%)
		RRM1_Fusilli	280..359	CDD:241182	19/88 (22%)
		RRM2_Fusilli	363..462	CDD:241185	24/127 (19%)
		RRM3_Fusilli	545..629	CDD:241187	21/74 (28%)
rbm12ba	NP_001071207.1	RRM1_RBM12_like	3..76	CDD:240954	17/82 (21%)
		RRM_SF	191..>251	CDD:302621	16/59 (27%)
		RRM_SF	332..402	CDD:240668	16/76 (21%)
		RRM4_RBM12B	436..511	CDD:241192	21/73 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170590314
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.840