DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fus and Esrp2

DIOPT Version :9

Sequence 1:NP_524691.1 Gene:fus / 44095 FlyBaseID:FBgn0023441 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_789808.1 Gene:Esrp2 / 77411 MGIID:1924661 Length:717 Species:Mus musculus


Alignment Length:878 Identity:324/878 - (36%)
Similarity:421/878 - (47%) Gaps:198/878 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQILVRPDGYFIKDRTISSSS 68
            |:.:|.|:.||.|..|..|||||.::||||:.::|..:.|:....:.|||.:.            
Mouse    27 PQSLVVLFGATAGALGPDLGSDETDLILLVWQVVEPRSRQVGTLHKSLVRAEA------------ 79

  Fly    69 DNSSVTNNTASSPPLAIGDANNGSGSTSGNGNSLENGSELILPIAEAQAAGKPLSEAIEEFDAYL 133
                    .|.||     .....||.:                 |::.|..:.|.:.:::|...:
Mouse    80 --------AALSP-----QCREASGLS-----------------ADSLARAESLDKVLQQFSQLV 114

  Fly   134 RS--LSLHDTEIKLVTDGQLPLRQCLHREASAKDVELPAYYNRFSDLRKEF-LRYKSGDLARALV 195
            ..  ..|......|.||||..|||.||.|||.|::.||..:..|.|||:|| :::.|...||.|.
Mouse   115 SGDVALLGGGPYVLCTDGQQLLRQVLHPEASRKNLVLPDTFFSFYDLRREFHMQHPSTCSARDLT 179

  Fly   196 PVKDVKKMLQAPTLPMPQSIAEMLGELNISSVEDNDFYIRESRDMVTVIQTLLQA--GHKFAANE 258
                            ..::|:.|| |...:.|| ||.:.|.:.||.||..||:.  |..|:..|
Mouse   180 ----------------VGTMAQDLG-LETDATED-DFGVWEVKTMVAVILHLLEGSNGQLFSKPE 226

  Fly   259 LVNLVLEPGICSIDDEVDGNCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEA 323
            :|....|.|.||..|.||...:||||||||||||||:|:||:|||:|:|||||||:..|||||||
Mouse   227 VVKQKYETGPCSKADVVDNETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEA 291

  Fly   324 LIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIRMRGLP 388
            |||||..|.||:||:|||||:|.||||||:|:||:|:.||||.|.|...|||:..|||:|:||||
Mouse   292 LIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGTSLEVARFLSREDQVILRLRGLP 356

  Fly   389 YDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIG 453
            :.|....||.|.    .|.|.|..|.:|:|||:.||||.|||||.|||.|..|..||.||:..:|
Mouse   357 FSAGPTDVLGFL----GPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLG 417

  Fly   454 QRYIELFRSTTAEVQQVLNRSMDPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGAS 518
            :|||||||||.|||||||||            ::..||   |||:..||||              
Mouse   418 KRYIELFRSTAAEVQQVLNR------------YAASPL---LPTLTAPLLP-------------- 453

  Fly   519 PANLCPPVPPPALPLPTQHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVIN 583
                        :|.|    :..||.::|:|||||||.|.:|.||.||.:.|..|...|||||:|
Mouse   454 ------------IPFP----LAGGTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLN 502

  Fly   584 AQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASPVAQP 648
            .||:|||:|||||...|.|...|||.|...|    |.||:||..||.::|:.||.||..|.....
Mouse   503 QQGRPSGDAFIQMMSVERALAAAQRCHKKMM----KERYVEVVPCSTEEMSRVLMGGSLSRSGLS 563

  Fly   649 PPPHLGHAHKQQSLLAATTGMFSSAGQSPTTVAAGTAQSPLGGTHTHTHPHSHAHAHATGHAHAA 713
            |||     .|...|             ||.|.|...|...|..|.|                   
Mouse   564 PPP-----CKLPCL-------------SPPTYATFQATPALIPTET------------------- 591

  Fly   714 AAAAHHGLSASSAMLPGLSAAASASGLASFMSAGQQSAAAAAHSAASLQNAAVALAPQGYALNPF 778
                 ..|..|||:||.....|:|:.||.:.....|   ...:..|...:..|:....||    .
Mouse   592 -----TALYPSSALLPAARVPAAATPLAYYPGPATQ---LYMNYTAYYPSPPVSPTTVGY----L 644

  Fly   779 SLPPPGSAAAAAASTPALLAQQQAQFIAQQSLLVRQQAAAAALAAEQQQQQQQQQQLYASAMLQQ 843
            :.||     .|.||||..:       ::|...|||.|...                 |.:.|...
Mouse   645 TTPP-----TALASTPTTM-------LSQPGALVRMQGVP-----------------YTAGMKDL 680

  Fly   844 HPLYLQQQQQQQQLYASAMLQQGQPQFVLMQRP 876
            ..:: |..|.....| :.::..|.|...::|.|
Mouse   681 LSVF-QAYQLAPDDY-TTLMPVGDPPRTVLQAP 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fusNP_524691.1 DnaQ_like_exo 13..194 CDD:299142 53/183 (29%)
RRM1_Fusilli 280..359 CDD:241182 60/78 (77%)
RRM2_Fusilli 363..462 CDD:241185 53/98 (54%)
RRM3_Fusilli 545..629 CDD:241187 44/83 (53%)
Esrp2NP_789808.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
DnaQ_like_exo <82..214 CDD:299142 48/171 (28%)
RRM1_ESRPs_Fusilli 248..322 CDD:240951 57/73 (78%)
RRM_SF 332..438 CDD:302621 64/121 (53%)
RRM3_ESRP1_ESRP2 464..544 CDD:241186 44/83 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845681
Domainoid 1 1.000 445 1.000 Domainoid score I530
eggNOG 1 0.900 - - E1_KOG1365
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32617
Inparanoid 1 1.050 445 1.000 Inparanoid score I1624
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003476
OrthoInspector 1 1.000 - - otm44282
orthoMCL 1 0.900 - - OOG6_104528
Panther 1 1.100 - - LDO PTHR13976
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2364
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.750

Return to query results.
Submit another query.