Protein Alignment fus and hnrnph3

DIOPT Version :9

• Sequence 1: NP_524691.1
• Gene: fus / 44095
• FlyBaseID: FBgn0023441
• Length: 967
• Species: Drosophila melanogaster
• Sequence 2: NP_001314853.1
• Gene: hnrnph3 / 678601
• ZFINID: ZDB-GENE-060421-3878
• Length: 396
• Species: Danio rerio
• Alignment Length: 454
• Identity: 113/454 - (24%)
• Similarity: 178/454 - (39%)
• Gaps: 130/454 - (28%)

  Fly   276 DGNCIVRARGLPWQSSDQDIAKFFRGLNVA--KGGVALCLSPLGRRNGEALIRFVCQEHRDMALK 338
            |...:||.|||||..:.:::|.||...::.  ..||....|..||.:|||.:.....|....||.
Zfish     5 DEGYVVRIRGLPWSCTQEEVASFFSDCDIVGKVNGVCFTFSKEGRPSGEAFVELKSSEDFKKALA 69

  Fly   339 RHKHHIGTRYIEVYRASGEDF---LAIAGGASNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFF 400
            :.:.::|.|||||:|::..:.   |..:|....:.    |.|.  ::|:||||:..:.::::.||
Zfish    70 KDRKYMGHRYIEVFRSNRSEMDWVLKRSGPTDYDG----SSGC--MLRLRGLPFGCSKEEIVQFF 128

  Fly   401 TTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTA 465
            :.....|       .|:.......||:||:|||.||::..|.||||:|:|.||.||||:|:|:..
Zfish   129 SGLKIVP-------NGITLPMDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRN 186

  Fly   466 EVQ---QVLNRSMD--PKNYE---SGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASP--- 519
            |::   :|..:.|.  |..|:   .|.|....|            .|..|...|....|.|.
Zfish   187 EMRAYYEVPRKIMGQRPSPYDRPMMGRGSFFGP------------GPGRGGAGLDQMRGGSGYSG 239

  Fly   520 -----------ANLCPPVPPPALPLPTQHLITSGTTKNCIR------------------------ 549
                       .|.|               ..:|..:..:|
Zfish   240 GYGGFDNYNGFNNYC---------------FDNGMFEERVRGDRGRGGTGTHGYSNDSNSGFHSG 289

  Fly   550 ----LRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRH 610
                :||||:.|....:.||......    ..||:.:...|:.:|||.::....|.|.....:..
Zfish   290 HFVHMRGLPFRATESDVAHFFGPLTP----VRVHIDMGPNGKSTGEADVEFRSHEDAVSAMSKDK 350

  Fly   611 NHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASPVAQPPPPHLGHAHKQQSLLAATTGMFSSAG 674
            ||     .::||||:|      :|...:|          |..:|..          .|.:||:|
Zfish   351 NH-----MQHRYIELF------LNSTSSG----------PSEMGRG----------GGFYSSSG 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fus	NP_524691.1	DnaQ_like_exo	13..194	CDD:299142
		RRM1_Fusilli	280..359	CDD:241182	28/80 (35%)
		RRM2_Fusilli	363..462	CDD:241185	35/98 (36%)
		RRM3_Fusilli	545..629	CDD:241187	23/111 (21%)
hnrnph3	NP_001314853.1	RRM1_hnRNPH_GRSF1_like	9..85	CDD:240947	27/75 (36%)
		RRM2_hnRNPH3	90..185	CDD:241176	37/107 (35%)
		RRM3_hnRNPH3	290..364	CDD:241179	22/88 (25%)
		RRM	<292..>351	CDD:223796	15/62 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170590315
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4211
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D392876at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.750