Sequence 1: | NP_524691.1 | Gene: | fus / 44095 | FlyBaseID: | FBgn0023441 | Length: | 967 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001032362.1 | Gene: | Hnrnpf / 64200 | RGDID: | 620366 | Length: | 415 | Species: | Rattus norvegicus |
Alignment Length: | 472 | Identity: | 122/472 - (25%) |
---|---|---|---|
Similarity: | 198/472 - (41%) | Gaps: | 130/472 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 280 IVRARGLPWQSSDQDIAKFFRGLNVAKG--GVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKH 342
Fly 343 HIGTRYIEVYRA--SGEDFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDT 405
Fly 406 PPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQV 470
Fly 471 LNRSMDPKNYESGGGHSQPPLIAQLPTMQLP--------------LLPQVG-------------- 507
Fly 508 -----------------------AHSLS----HSLGASPANLCPPVPPPALPLPTQHLITSGTTK 545
Fly 546 NCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDL-EESARLCAQRR 609
Fly 610 HNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASPVAQPPPPHLGHAHKQQSLLAATTGMFSSAG 674
Fly 675 QSPTTVAAGTAQSPLGG 691 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fus | NP_524691.1 | DnaQ_like_exo | 13..194 | CDD:299142 | |
RRM1_Fusilli | 280..359 | CDD:241182 | 26/82 (32%) | ||
RRM2_Fusilli | 363..462 | CDD:241185 | 36/98 (37%) | ||
RRM3_Fusilli | 545..629 | CDD:241187 | 25/84 (30%) | ||
Hnrnpf | NP_001032362.1 | RRM1_hnRNPH_hnRNPH2_hnRNPF | 10..88 | CDD:410128 | 26/75 (35%) |
Interaction with RNA. /evidence=ECO:0000250 | 81..86 | 4/4 (100%) | |||
RRM2_hnRNPH_hnRNPH2_hnRNPF | 103..192 | CDD:410130 | 37/100 (37%) | ||
Interaction with RNA. /evidence=ECO:0000250 | 179..184 | 4/4 (100%) | |||
zf-RNPHF | 255..290 | CDD:369688 | 7/52 (13%) | ||
RRM3_hnRNPH_CRSF1_like | 289..363 | CDD:409929 | 25/83 (30%) | ||
Interaction with RNA. /evidence=ECO:0000250 | 355..360 | 4/4 (100%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349089 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4211 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D392876at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |