Sequence 1: | NP_524691.1 | Gene: | fus / 44095 | FlyBaseID: | FBgn0023441 | Length: | 967 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001334416.1 | Gene: | Hnrnph1 / 59013 | MGIID: | 1891925 | Length: | 472 | Species: | Mus musculus |
Alignment Length: | 523 | Identity: | 125/523 - (23%) |
---|---|---|---|
Similarity: | 209/523 - (39%) | Gaps: | 129/523 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 280 IVRARGLPWQSSDQDIAKFFRGLNVAKG--GVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKH 342
Fly 343 HIGTRYIEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPP 407
Fly 408 CHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLN 472
Fly 473 RSMDPKNYESGGGHSQPPLIAQLPTMQLP-LLPQVGAHSLSHSLGASPA---------------- 520
Fly 521 ---------------------NLCPPVPPPALPLPTQHLITSG------TTKNCIRLRGLPYEAM 558
Fly 559 VEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYRYI 623
Fly 624 EVFQCSGDDMNMV--LNGGLASPVAQPPPPHLGHAHKQQSL-LAATTG---------MFSSAGQS 676
Fly 677 PTTVAAGTAQSPLGGTHTHTHPHSHAHAHATGHAHAAAAAAHHGLSASSAM-----LPGLSAAAS 736
Fly 737 ASG 739 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fus | NP_524691.1 | DnaQ_like_exo | 13..194 | CDD:299142 | |
RRM1_Fusilli | 280..359 | CDD:241182 | 24/80 (30%) | ||
RRM2_Fusilli | 363..462 | CDD:241185 | 32/98 (33%) | ||
RRM3_Fusilli | 545..629 | CDD:241187 | 24/83 (29%) | ||
Hnrnph1 | NP_001334416.1 | RRM1_hnRNPH_hnRNPH2_hnRNPF | 10..88 | CDD:410128 | 24/75 (32%) |
RRM2_hnRNPH_hnRNPH2_hnRNPF | 103..192 | CDD:410130 | 35/98 (36%) | ||
2 X 16 AA Gly-rich approximate repeats | 234..433 | 45/236 (19%) | |||
zf-RNPHF | 255..290 | CDD:369688 | 6/41 (15%) | ||
RRM3_hnRNPH_hnRNPH2_hnRNPF | 289..364 | CDD:410133 | 25/89 (28%) | ||
2 X 19 AA perfect repeats | 354..392 | 12/56 (21%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4211 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D392876at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |