Protein Alignment fus and grsf1

DIOPT Version :9

• Sequence 1: NP_524691.1
• Gene: fus / 44095
• FlyBaseID: FBgn0023441
• Length: 967
• Species: Drosophila melanogaster
• Sequence 2: XP_005165391.1
• Gene: grsf1 / 563249
• ZFINID: ZDB-GENE-060825-196
• Length: 403
• Species: Danio rerio
• Alignment Length: 473
• Identity: 118/473 - (24%)
• Similarity: 192/473 - (40%)
• Gaps: 119/473 - (25%)

  Fly   182 FLRYKSGDLARALVPVKDVKKMLQAPTLPMPQSIAEMLGELNISSVEDNDFYIRESRDMVTVIQT 246
            |.::|...|:|:.:....|:.:.::|..|       .|..||.|....    :..:|.:
Zfish    12 FAQFKMSGLSRSALLFSLVRCVRRSPRFP-------CLETLNHSKTAQ----LTSARGL------ 59

  Fly   247 LLQAGHKFAANELVN-------LVLEPGIC----SIDDE-------VDGN--------CIVRARG 285
               :.|......|.:       :..:..:|    |.|||       ..|:        .||:|:|
Zfish    60 ---SVHSLTTRYLADCKAKNPWMFSQRSLCSEAPSKDDEYPPLPEYTPGSEENQAKELFIVQAKG 121

  Fly   286 LPWQSSDQDIAKFFRGLNVAKG--GVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRY 348
            |||..:.:||..||....:..|  ||.:..:..|:.:|:|.|....:|....||.:|:|::..|:
Zfish   122 LPWSCTAEDIMSFFSECRIRGGVNGVHILYNKYGKPSGQAFIELEHEEDVGKALDQHRHYLRDRF 186

  Fly   349 IEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDG 413
            |||...:.:|..||...:....:      ...::|:|||||..|...::.||:..|..
Zfish   187 IEVREVTNKDAEAILKASKERVE------TDTVVRLRGLPYSCTEGDIIRFFSGLDVV------- 238

  Fly   414 NEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMDPK 478
            .:||..:....|:::|||||.||.:..|.|||.:.||.:|.||||:|
Zfish   239 EDGVTIILNRRGKSSGDAFVEFATKAMAEKALKKDREILGNRYIEIF------------------ 285

  Fly   479 NYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITSGT 543
                      |.:.:.:|:..         .|..:....:|....||            |..:..
Zfish   286 ----------PAMKSAIPSQN---------RSWQNDRVFTPRAEDPP------------LRNTTV 319

  Fly   544 TKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQR 608
            |||.|.:||||::|..|.|:.|   ||. :....|.:....:|:|:|||.......|.|.| |..
Zfish   320 TKNVIHMRGLPFDAKAEDIVKF---FAP-VRLMKVVVEFGPEGKPTGEAEAYFKTHEDAVL-AMS 379

  Fly   609 RHNHYMMFGKKYRYIEVF 626
            :...::|    .||||::
Zfish   380 KDREFIM----ERYIELY 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fus	NP_524691.1	DnaQ_like_exo	13..194	CDD:299142	4/11 (36%)
		RRM1_Fusilli	280..359	CDD:241182	27/80 (34%)
		RRM2_Fusilli	363..462	CDD:241185	32/98 (33%)
		RRM3_Fusilli	545..629	CDD:241187	28/82 (34%)
grsf1	XP_005165391.1	RRM	106..403	CDD:223796	98/359 (27%)
		RRM1_GRSF1	114..192	CDD:241174	27/77 (35%)
		RRM2_GRSF1	211..285	CDD:240949	31/80 (39%)
		RRM_SF	324..396	CDD:302621	26/79 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170590302
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4211
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D392876at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.750