DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fus and ESRP1

DIOPT Version :9

Sequence 1:NP_524691.1 Gene:fus / 44095 FlyBaseID:FBgn0023441 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_060167.2 Gene:ESRP1 / 54845 HGNCID:25966 Length:681 Species:Homo sapiens


Alignment Length:658 Identity:282/658 - (42%)
Similarity:368/658 - (55%) Gaps:126/658 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQILVRPDGYFIKDRTISSSS 68
            |:::|.|:..|.|..|:.|||||||:|||.:.:::::..::....::||||              
Human     5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKVGQLHEVLVRP-------------- 55

  Fly    69 DNSSVTNNTASSPPLAIGDANNGSGSTSGNGNSLENGSELILPIAEAQAAGKPLSEAIEEFDAYL 133
            |...:|.:......:.:              .||.:.|:              |.:|:.:|:   
Human    56 DQLELTEDCKEETKIDV--------------ESLSSASQ--------------LDQALRQFN--- 89

  Fly   134 RSLSLH-----DTEIKLVTDGQLPLRQCLHREASAKDVELPAYYNRFSDLRKEFLRYKSGDLARA 193
            :|:|..     .|...|.|||||.:||.||.|||.|:|.||..:..|.||||||.:...|.    
Human    90 QSVSNELNIGVGTSFCLCTDGQLHVRQILHPEASKKNVLLPECFYSFFDLRKEFKKCCPGS---- 150

  Fly   194 LVPVKDVKKMLQAPTLPMPQSIAEMLGELNI---SSVEDNDFYIRESRDMVTVIQTLLQA--GHK 253
                .|:.|:          .:|.|...||.   |||  :.:...:..||..:|..::..  .|:
Human   151 ----PDIDKL----------DVATMTEYLNFEKSSSV--SRYGASQVEDMGNIILAMISEPYNHR 199

  Fly   254 FAANELVNLVLEPGICSIDDEVDGNCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGR 318
            |:..|.||...|.|.||..:.:|.|.:||||||||||||||||:||:|||:||||.||||:..||
Human   200 FSDPERVNYKFESGTCSKMELIDDNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGR 264

  Fly   319 RNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIR 383
            ||||||:|||.:||||:||:|||||:||||||||:|:|||||.||||.|||...||||..|||:|
Human   265 RNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVR 329

  Fly   384 MRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRH 448
            |||||:.|||::|:.||    ...|.:..|.||:|||..||||.|||||||||.|..|..||.:|
Human   330 MRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKH 390

  Fly   449 RESIGQRYIELFRSTTAEVQQVLNRSMDPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSH 513
            ::.:|:|||||||||.|||||||||            .|..||| .|||                
Human   391 KDLLGKRYIELFRSTAAEVQQVLNR------------FSSAPLI-PLPT---------------- 426

  Fly   514 SLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGV 578
                          ||.:|:..|..:.....::|||||||||.|.:|.||.||.:||..|...||
Human   427 --------------PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTHGV 477

  Fly   579 HMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLAS 643
            |||:|.||:|||:|||||...:.|.:.||:.|...|    |.||:||||||.::||.||.||..:
Human   478 HMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLMGGTLN 538

  Fly   644 PVAQPPPP 651
            .....|||
Human   539 RNGLSPPP 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fusNP_524691.1 DnaQ_like_exo 13..194 CDD:299142 53/185 (29%)
RRM1_Fusilli 280..359 CDD:241182 62/78 (79%)
RRM2_Fusilli 363..462 CDD:241185 57/98 (58%)
RRM3_Fusilli 545..629 CDD:241187 46/83 (55%)
ESRP1NP_060167.2 DnaQ_like_exo 29..168 CDD:324557 50/201 (25%)
RRM1_ESRP1 221..305 CDD:241180 64/83 (77%)
RRM2_ESRP1 310..418 CDD:241183 68/123 (55%)
RRM3_ESRP1_ESRP2 444..524 CDD:241186 46/83 (55%)
DUF4813 <537..635 CDD:318322 3/10 (30%)
RRM_SF 634..>672 CDD:327398
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155208
Domainoid 1 1.000 446 1.000 Domainoid score I526
eggNOG 1 0.900 - - E1_KOG1365
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 446 1.000 Inparanoid score I1639
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003476
OrthoInspector 1 1.000 - - otm42228
orthoMCL 1 0.900 - - OOG6_104528
Panther 1 1.100 - - O PTHR13976
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2832
SonicParanoid 1 1.000 - - X2364
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.780

Return to query results.
Submit another query.