Protein Alignment fus and Hnrnph3

DIOPT Version :9

• Sequence 1: NP_524691.1
• Gene: fus / 44095
• FlyBaseID: FBgn0023441
• Length: 967
• Species: Drosophila melanogaster
• Sequence 2: NP_001102002.1
• Gene: Hnrnph3 / 361838
• RGDID: 1310019
• Length: 346
• Species: Rattus norvegicus
• Alignment Length: 274
• Identity: 71/274 - (25%)
• Similarity: 106/274 - (38%)
• Gaps: 95/274 - (34%)

  Fly   272 DDEVDGNCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMA 336
            :|..||.  ||.||||:..|.::|.:||:||.:...|:.|.:...||..|||.::|..:|..:.|
  Rat    11 NDASDGT--VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENA 73

  Fly   337 LKRHKHHIGTRYIEVYRASGEDFLAI--------------------------------------- 362
            |.:||..||.||||::|:|..:....
  Rat    74 LGKHKERIGHRYIEIFRSSRSEIKGFYDPPRRLLGQRPGPYDRPIGGRGGYYGAGRGSMYDRMRR 138

  Fly   363 ------------------------------------------AGGASNEAQAFLSKGAQVIIRMR 385
                                                      .|||.:.:..|  .|.. .:.||
  Rat   139 GGDGYDGGYGGFDDYGGYNNYGYGNDGFDDRMRDGRGMGGHGYGGAGDASSGF--HGGH-FVHMR 200

  Fly   386 GLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRE 450
            |||:.||...:.:||:..:....|:..|         .||||||:|.|.|....||..|:.:.:.
  Rat   201 GLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHEDAVAAMSKDKN 256

  Fly   451 SIGQRYIELFRSTT 464
            ::..||||||.::|
  Rat   257 NMQHRYIELFLNST 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fus	NP_524691.1	DnaQ_like_exo	13..194	CDD:299142
		RRM1_Fusilli	280..359	CDD:241182	33/78 (42%)
		RRM2_Fusilli	363..462	CDD:241185	34/98 (35%)
		RRM3_Fusilli	545..629	CDD:241187
Hnrnph3	NP_001102002.1	RRM2_hnRNPH3	1..93	CDD:410131	35/83 (42%)
		RRM3_hnRNPH3	195..269	CDD:241179	29/83 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166349092
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4211
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D392876at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.750