Sequence 1: | NP_524691.1 | Gene: | fus / 44095 | FlyBaseID: | FBgn0023441 | Length: | 967 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001277069.1 | Gene: | rbm12bb / 334496 | ZFINID: | ZDB-GENE-030131-6428 | Length: | 685 | Species: | Danio rerio |
Alignment Length: | 460 | Identity: | 96/460 - (20%) |
---|---|---|---|
Similarity: | 159/460 - (34%) | Gaps: | 155/460 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 280 IVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHI 344
Fly 345 ---------------------GTRYIE----------VYRASGE-----------------DFLA 361
Fly 362 IAG--------GASNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVL 418
Fly 419 FVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAE----------------- 466
Fly 467 -VQQVLNRSMDPKNYES---GGGHSQ--------PPLIAQLPTMQLPLLP------QVGAHSLSH 513
Fly 514 S--------LGASPANLCPPVPPP----------ALPLPTQHLIT-------------------- 540
Fly 541 -SGTTKN-------CIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMD 597
Fly 598 LEESA 602 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fus | NP_524691.1 | DnaQ_like_exo | 13..194 | CDD:299142 | |
RRM1_Fusilli | 280..359 | CDD:241182 | 29/126 (23%) | ||
RRM2_Fusilli | 363..462 | CDD:241185 | 28/106 (26%) | ||
RRM3_Fusilli | 545..629 | CDD:241187 | 15/65 (23%) | ||
rbm12bb | NP_001277069.1 | RRM1_RBM12B | 2..80 | CDD:241188 | 21/79 (27%) |
RRM2_RBM12B | 157..234 | CDD:241190 | 26/85 (31%) | ||
RRM_SF | 275..355 | CDD:302621 | 10/80 (13%) | ||
RRM | <352..559 | CDD:223796 | 17/96 (18%) | ||
RRM_SF | 391..466 | CDD:302621 | 14/57 (25%) | ||
RRM | 521..>682 | CDD:223796 | |||
RRM5_RBM12_like | 609..683 | CDD:240959 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590313 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |