Sequence 1: | NP_524691.1 | Gene: | fus / 44095 | FlyBaseID: | FBgn0023441 | Length: | 967 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997754.2 | Gene: | hnrnph1l / 321556 | ZFINID: | ZDB-GENE-030131-275 | Length: | 407 | Species: | Danio rerio |
Alignment Length: | 494 | Identity: | 121/494 - (24%) |
---|---|---|---|
Similarity: | 206/494 - (41%) | Gaps: | 129/494 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 272 DDEVDGNCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVAL--CLSPLGRRNGEALIRFVCQEHRD 334
Fly 335 MALKRHKHHIGTRYIEVYRASGEDF---LAIAGGASNEAQAFLSKGAQVIIRMRGLPYDATAKQV 396
Fly 397 LDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFR 461
Fly 462 STTAEVQ---QVLNRSM-----DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLS------ 512
Fly 513 ------HSLGASP------ANLCPPVPPPALPLPTQHLITSGTTKNCIRLRGLPYEAMVEHILHF 565
Fly 566 LDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSG 630
Fly 631 DDMNMVL---NGGLASPVAQPPPPHLGHAHKQQSLLAATTGMFSSAGQSPTTVAAGTAQSPLGGT 692
Fly 693 HTHTHPHSHAHAHATGHAHAAAAAAHHGLSASSAMLPGL 731 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fus | NP_524691.1 | DnaQ_like_exo | 13..194 | CDD:299142 | |
RRM1_Fusilli | 280..359 | CDD:241182 | 25/80 (31%) | ||
RRM2_Fusilli | 363..462 | CDD:241185 | 33/98 (34%) | ||
RRM3_Fusilli | 545..629 | CDD:241187 | 24/83 (29%) | ||
hnrnph1l | NP_997754.2 | RRM | <1..>74 | CDD:223796 | 23/73 (32%) |
RRM_SF | 6..84 | CDD:302621 | 25/77 (32%) | ||
RRM | <58..>168 | CDD:223796 | 32/122 (26%) | ||
RRM_SF | 89..184 | CDD:302621 | 35/107 (33%) | ||
zf-RNPHF | <237..255 | CDD:116685 | 4/35 (11%) | ||
RRM3_hnRNPH_hnRNPH2_hnRNPF | 254..329 | CDD:241178 | 25/89 (28%) | ||
RRM | <254..>310 | CDD:223796 | 18/60 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590308 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4211 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D392876at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.750 |