DRSC/TRiP Functional Genomics Resources

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Protein Alignment fus and RBM12

DIOPT Version :9

Sequence 1:NP_524691.1 Gene:fus / 44095 FlyBaseID:FBgn0023441 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_001185767.1 Gene:RBM12 / 10137 HGNCID:9898 Length:932 Species:Homo sapiens


Alignment Length:650 Identity:144/650 - (22%)
Similarity:235/650 - (36%) Gaps:195/650 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 LVPVKDVKKMLQAPTLPMPQSIAEMLGELNISSVEDNDFYIRESRDMVTVIQTLLQAGHKFAANE 258
            |.|:..:..:...|..|:|..:......:|::: ..|..:: ...:.|..||...|:..|     
Human   238 LPPMSGMPPLNPPPVAPLPAGMNGSGAPMNLNN-NLNPMFL-GPLNPVNPIQMNSQSSVK----- 295

  Fly   259 LVNLVLEPGICSIDDEVDGNCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEA 323
              .|.:.|     ||     ..|...|:|:.:.:.|:..||.||.|  ..|.|....:||.||..
Human   296 --PLPINP-----DD-----LYVSVHGMPFSAMENDVRDFFHGLRV--DAVHLLKDHVGRNNGNG 346

  Fly   324 LIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAG-----------GASNEAQAFLSKG 377
            |::|:..:....||||::..:..||:||..|:...::|..|           |.::.....|.:.
Human   347 LVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRS 411

  Fly   378 ----------------AQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVK-KPDG 425
                            |...:.::|||::|..|.|:|||..        ||..|..:::. .|:|
Human   412 KSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKK--------LDIVEDSIYIAYGPNG 468

  Fly   426 RATGDAFVLFANETDAPKALGRHRESIGQRYIELFRST---TAEVQQVLNRSMDPKNYESGGGHS 487
            :|||:.||.|.||.|...||.||::.:|.|:|::...|   ..|...::.:.:...:|:.     
Human   469 KATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQ----- 528

  Fly   488 QPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIRLRG 552
                      .::.|.|:...:|                                 .|.|..:..
Human   529 ----------REMILNPEGDVNS---------------------------------AKVCAHITN 550

  Fly   553 LPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFG 617
            :|:......:|.||:...  :....||::::..||..|:|.:|...|:.||. ::|.|.      
Human   551 IPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDARK-SERLHR------ 606

  Fly   618 KKYRYIEVF--QCSGDDMNMVLNG-------GLASPVAQPPPPHLGHAHKQQSLLAATTGMFSSA 673
            ||....|.|  ..:.:||..:...       ||..||...|               |..|| .:|
Human   607 KKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMPVPGNP---------------AVPGM-PNA 655

  Fly   674 GQSPTTVAAGTAQSPLGGTHTHTHPHSHAHAHATGHAHAAAAAAHHGLSASSAMLPGLSAAASAS 738
            |    ....|...:.|.|          |...:||..         |.:.:||.|||        
Human   656 G----LPGVGLPSAGLPG----------AGLPSTGLP---------GSAITSAGLPG-------- 689

  Fly   739 GLASFMSAGQQSAAAAAHSAASLQNAAVALAPQGYALNPFS--------------LPPPGSAAAA 789
              |...|||..||....|:..::.:......|      ||:              :||||....|
Human   690 --AGMPSAGIPSAGGEEHAFLTVGSKEANNGP------PFNFPGNFGGSNAFGPPIPPPGLGGGA 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fusNP_524691.1 DnaQ_like_exo 13..194 CDD:299142 143/649 (22%)
RRM1_Fusilli 280..359 CDD:241182 26/78 (33%)
RRM2_Fusilli 363..462 CDD:241185 34/126 (27%)
RRM3_Fusilli 545..629 CDD:241187 22/85 (26%)
RBM12NP_001185767.1 RRM1_RBM12 1..92 CDD:241189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..116
RRM2_RBM12 303..377 CDD:241191 26/80 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 392..424 2/31 (6%)
RRM3_RBM12 421..521 CDD:240956 33/107 (31%)
RRM4_RBM12 545..632 CDD:241193 23/95 (24%)
Sporozoite_P67 <633..>764 CDD:253298 36/168 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 717..853 7/35 (20%)
RRM5_RBM12 855..929 CDD:241195
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155212
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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