DRSC/TRiP Functional Genomics Resources

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Protein Alignment fus and RBM12

DIOPT Version :10

Sequence 1:NP_524691.1 Gene:fus / 44095 FlyBaseID:FBgn0023441 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_006038.2 Gene:RBM12 / 10137 HGNCID:9898 Length:932 Species:Homo sapiens


Alignment Length:650 Identity:144/650 - (22%)
Similarity:235/650 - (36%) Gaps:195/650 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 LVPVKDVKKMLQAPTLPMPQSIAEMLGELNISSVEDNDFYIRESRDMVTVIQTLLQAGHKFAANE 258
            |.|:..:..:...|..|:|..:......:|::: ..|..:: ...:.|..||...|:..|     
Human   238 LPPMSGMPPLNPPPVAPLPAGMNGSGAPMNLNN-NLNPMFL-GPLNPVNPIQMNSQSSVK----- 295

  Fly   259 LVNLVLEPGICSIDDEVDGNCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEA 323
              .|.:.|     ||     ..|...|:|:.:.:.|:..||.||.|  ..|.|....:||.||..
Human   296 --PLPINP-----DD-----LYVSVHGMPFSAMENDVRDFFHGLRV--DAVHLLKDHVGRNNGNG 346

  Fly   324 LIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAG-----------GASNEAQAFLSKG 377
            |::|:..:....||||::..:..||:||..|:...::|..|           |.::.....|.:.
Human   347 LVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRS 411

  Fly   378 ----------------AQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVK-KPDG 425
                            |...:.::|||::|..|.|:|||..        ||..|..:::. .|:|
Human   412 KSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKK--------LDIVEDSIYIAYGPNG 468

  Fly   426 RATGDAFVLFANETDAPKALGRHRESIGQRYIELFRST---TAEVQQVLNRSMDPKNYESGGGHS 487
            :|||:.||.|.||.|...||.||::.:|.|:|::...|   ..|...::.:.:...:|:.     
Human   469 KATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQ----- 528

  Fly   488 QPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIRLRG 552
                      .::.|.|:...:|                                 .|.|..:..
Human   529 ----------REMILNPEGDVNS---------------------------------AKVCAHITN 550

  Fly   553 LPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFG 617
            :|:......:|.||:...  :....||::::..||..|:|.:|...|:.||. ::|.|.      
Human   551 IPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDARK-SERLHR------ 606

  Fly   618 KKYRYIEVF--QCSGDDMNMVLNG-------GLASPVAQPPPPHLGHAHKQQSLLAATTGMFSSA 673
            ||....|.|  ..:.:||..:...       ||..||...|               |..|| .:|
Human   607 KKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMPVPGNP---------------AVPGM-PNA 655

  Fly   674 GQSPTTVAAGTAQSPLGGTHTHTHPHSHAHAHATGHAHAAAAAAHHGLSASSAMLPGLSAAASAS 738
            |    ....|...:.|.|          |...:||..         |.:.:||.|||        
Human   656 G----LPGVGLPSAGLPG----------AGLPSTGLP---------GSAITSAGLPG-------- 689

  Fly   739 GLASFMSAGQQSAAAAAHSAASLQNAAVALAPQGYALNPFS--------------LPPPGSAAAA 789
              |...|||..||....|:..::.:......|      ||:              :||||....|
Human   690 --AGMPSAGIPSAGGEEHAFLTVGSKEANNGP------PFNFPGNFGGSNAFGPPIPPPGLGGGA 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fusNP_524691.1 DnaQ_like_exo 13..194 CDD:447876 143/649 (22%)
RRM1_Fusilli 280..359 CDD:241182 26/78 (33%)
RRM2_Fusilli 363..462 CDD:410137 34/126 (27%)
RRM3_Fusilli 545..629 CDD:241187 22/85 (26%)
RBM12NP_006038.2 RRM1_RBM12 1..92 CDD:241189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..116
RRM2_RBM12 303..377 CDD:410141 26/80 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 392..424 2/31 (6%)
RRM3_RBM12 421..521 CDD:409934 33/107 (31%)
RRM4_RBM12 545..632 CDD:410143 23/95 (24%)
PHA03378 <631..>699 CDD:223065 26/116 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 717..853 7/35 (20%)
RRM5_RBM12 855..930 CDD:410145
Blue background indicates that the domain is not in the aligned region.

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