DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and bel

DIOPT Version :9

Sequence 1:NP_001286188.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster


Alignment Length:684 Identity:188/684 - (27%)
Similarity:289/684 - (42%) Gaps:162/684 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GATKNLDLIGTIEDDAEVENLSEDSDAEVEYQPTKLRHKKVTEFEK--------GFEFVSSVKEY 58
            |:..||:           |..:||..|:.:.||   |:.:..|.|:        |.:.....:.|
  Fly   176 GSGSNLN-----------EQTAEDGQAQQQQQP---RNDRWQEPERPAGFDGSEGGQSAGGNRSY 226

  Fly    59 NQDTWDDLMKYVKRKARTKTDDKIAARLQKRGGAEAVAAEQSDGSEIDLSEDELKHDNLRLREKK 123
            |.                        |.::.||......::..||.:|.:               
  Fly   227 NN------------------------RGERGGGGYNSRWKEGGGSNVDYT--------------- 252

  Fly   124 ESKKKKKKAGEEDEEDEGEKMQFADT-----------VEANEQ-----ITSFYQMNLSRPLMRAI 172
                   |.|..||..|.|.....:|           |||..|     ||||..:.|:..:...:
  Fly   253 -------KLGARDERLEVELFGVGNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNV 310

  Fly   173 GVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYR------PLNNKAITR 231
            .:..|..|||:|...||:.:.|||:..||.||:|||||:::|.|.: :|.      |.:.:..:|
  Fly   311 ALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQ-MYELGHVPPPQSTRQYSR 374

  Fly   232 ------VLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRL 290
                  .|||.|||||..|:::..|:....:.:...:..||.:...|...|.:...:::||||||
  Fly   375 RKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRL 439

  Fly   291 IDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSC----CKTRQTMLFSATMSEQVKD 351
            .|.| ......|::|..|:|||||||||..|..|::.|:...    ...|||::||||..:|:::
  Fly   440 EDMI-TRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQE 503

  Fly   352 LAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIREDKEGDREPILASLICR-------TFHDHCMVF 409
            ||:..|...|.:.|......:.|:.|..:.:.|.   |:...|..|:..       |.....::|
  Fly   504 LASDFLSNYIFLAVGRVGSTSENITQTILWVYEP---DKRSYLLDLLSSIRDGPEYTKDSLTLIF 565

  Fly   410 VQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKT 474
            |:|||.|..|...|.........:||:.||::|.|:|:.|:.....:|:||.||||||||..||.
  Fly   566 VETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKH 630

  Fly   475 VINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAESTIKNRIIPPEIIEKY 539
            ||||.:|...|.|:||:|||.|.|..|::.|...||.|.|..|:::                   
  Fly   631 VINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLE------------------- 676

  Fly   540 RNKLTSLEPEIQNILDEEQAERQLAKTEQQLSKTERKLLGQTNERR--GWFQTKQQREAEKDRLA 602
              .|...:.||.:.:::..::|         .....|..|:....|  |.|.::..|:       
  Fly   677 --LLIETKQEIPSFMEDMSSDR---------GHGGAKRAGRGGGGRYGGGFGSRDYRQ------- 723

  Fly   603 LTTGDEDKASGGKGKGKTAGKRKRPEYGGDGEDG 636
                    :|||.|.|::.   ..|..||.|..|
  Fly   724 --------SSGGGGGGRSG---PPPRSGGSGSGG 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_001286188.1 PTZ00424 148..537 CDD:185609 141/427 (33%)
DEADc 159..364 CDD:238167 75/220 (34%)
Helicase_C 393..498 CDD:278689 45/111 (41%)
belNP_001262379.1 DEADc 297..516 CDD:238167 75/220 (34%)
DEXDc 315..529 CDD:214692 75/215 (35%)
Helicase_C 538..654 CDD:278689 46/115 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451558
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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