DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and CG7483

DIOPT Version :10

Sequence 1:NP_651970.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster


Alignment Length:396 Identity:126/396 - (31%)
Similarity:205/396 - (51%) Gaps:24/396 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KKKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALL 193
            :|.|..||..:    ::| :|.|..|.|.:|..|||...|:|.|...|:..|:.||..:|...:.
  Fly     3 RKNAQAEDLSN----VEF-ETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVK 62

  Fly   194 GRDICGCAATGTGKTAAYMLPTLERL--LYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFT 256
            |||:...|.:||||||.:.:..|:.|  ..|.      |:||.|.|||||..|:.:|...|....
  Fly    63 GRDVIAQAQSGTGKTATFSISILQSLDTTLRE------TQVLCLSPTRELAVQIQKVILALGDMM 121

  Fly   257 TIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYF 321
            .:...:.|||.::......|.....||..||||:.|.||.....| .:|::|:|||||.||::.|
  Fly   122 NVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRT-RAIKMLVLDEADEMLNKGF 185

  Fly   322 AEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIREDK 386
            .||:.::........|.:|.|||:..::.::.:..:..||::.|..::.....::|.|:.:    
  Fly   186 KEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAV---- 246

  Fly   387 EGDREPILASLICRTFH----DHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLK 447
              :||......:|..:.    ...::|..||::...|...:.........:||::.|::|.|.:|
  Fly   247 --EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMK 309

  Fly   448 KFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKER 512
            :|:..|..|||.|||.|||:|:..|..|||:.:|...|.||||:||:.|.||.|::::.....:.
  Fly   310 EFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 374

  Fly   513 KIVKDI 518
            :|::||
  Fly   375 RILRDI 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_651970.1 SrmB 156..576 CDD:440279 118/369 (32%)
CG7483NP_649788.2 DEAD-like_helicase_N 4..399 CDD:475120 126/395 (32%)

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